myRT

myRT report for GCA_001991625.1_ASM199162v1

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Seq: MUQW01000138.1 Burkholderia cenocepacia strain VC14507 VC14507_contig-3000011, whole genome shotgun sequence (61141 bp)
Overview 1 RT 1: 56142-61076 bp Neighborhood of RT #1 [56142, 61132] MFS_MMR_MDR_like AcrR RVT-GII GIIM COG3547 Feature: gene Location: 56142-57662 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56184-57597 bp Feature: domain Description: MFS_MMR_MDR_like Location: 561 84-57597 bp Feature: gene Location: 57808-58446 bp Feature: domain Description: AcrR Location: 57871-58432 bp Feature: domain Description: AcrR Location: 57871 -58432 bp Feature: gene Location: 58536-59933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58869-59487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58869-59487 bp Feature: domain Description: GIIM Note: maturase Location: 59538-59748 bp Feature: domain Description: GIIM Note: maturase Location: 59538-59748 bp Feature: gene Location: 60098-61132 bp Feature: domain Description: COG3547 Location: 60113-61076 bp Feature: domain Description: COG3547 Location: 601 1 3-61 076 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), AcrR (COG1309), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: MUQW01000096.1 Burkholderia cenocepacia strain VC14507 VC14507_contig-2000007, whole genome shotgun sequence (142392 bp)
Overview 1 RT 1: 126550-130365 bp Neighborhood of RT #1 [126550, 130370] Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 126550-126879 bp Feature: domain Description: Histone_HNS Location: 126571-126808 bp Feature: domain Description: Histone_HNS Location: 12 6571-12 6808 bp Feature: gene Location: 127026-127232 bp Feature: gene Location: 127205-128554 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127670-128306 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 7670-12 8306 bp Feature: gene Location: 128808-129380 bp Feature: domain Description: FIN Location: 128994-129345 bp Feature: domain Description: FIN Location: 12 8994-12 9345 bp Feature: gene Location: 129615-130370 bp Feature: domain Description: his_ut_repres Location: 129693-130365 bp Feature: domain Description: his_ut_repres Location: 12 9693-130365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: MUQW01000055.1 Burkholderia cenocepacia strain VC14507 VC14507_contig-4000004, whole genome shotgun sequence (19310 bp)
Overview 1 RT 1: 3716-9401 bp Neighborhood of RT #1 [3716, 9445] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Feature: gene Location: 3716-4228 bp Feature: domain Description: SnoaL_4 Location: 3737-4106 bp Feature: domain Description: SnoaL_4 Location: 3 73 7-4106 bp Feature: gene Location: 4281-4997 bp Feature: domain Description: EthD Location: 4347-4533 bp Feature: domain Description: EthD Location: 43 47-453 3 bp Feature: domain Description: EthD Location: 4671-4944 bp Feature: domain Description: EthD Location: 4671-4944 bp Feature: gene Location: 5094-6335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5286-5904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5286-5904 bp Feature: domain Description: GIIM Note: maturase Location: 5955-6159 bp Feature: domain Description: GIIM Note: maturase Location: 5955-6159 bp Feature: gene Location: 6934-8517 bp Feature: domain Description: PRK06498 Location: 6937-8515 bp Feature: domain Description: PRK06498 Location: 693 7-8515 bp Feature: gene Location: 8924-9445 bp Feature: domain Description: YeaK Location: 8945-9401 bp Feature: domain Description: YeaK Location: 8945-9401 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336)