myRT

myRT report for GCA_001991655.1_ASM199165v1

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Seq: MURI01000002.1 Burkholderia cenocepacia strain VC10878 VC10878_contig-1000000, whole genome shotgun sequence (124081 bp)
Overview 1 RT 1: 114429-120036 bp Neighborhood of RT #1 [114429, 120158] YeaK PRK06498 RVT-GII GIIM EthD EthD SnoaL_4 Feature: gene Location: 114429-114950 bp Feature: domain Description: YeaK Location: 114450-114906 bp Feature: domain Description: YeaK Location: 1 1 4450-1 1 4906 bp Feature: gene Location: 115357-116940 bp Feature: domain Description: PRK06498 Location: 115360-116938 bp Feature: domain Description: PRK06498 Location: 1 1 5360-1 1 6938 bp Feature: gene Location: 117539-118780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117731-118349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 7731 -1 1 8349 bp Feature: domain Description: GIIM Note: maturase Location: 118400-118604 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 8400-1 1 8604 bp Feature: gene Location: 118877-119593 bp Feature: domain Description: EthD Location: 118943-119129 bp Feature: domain Description: EthD Location: 1 1 8943-1 1 91 29 bp Feature: domain Description: EthD Location: 119267-119540 bp Feature: domain Description: EthD Location: 1 1 9267-1 1 9540 bp Feature: gene Location: 119646-120158 bp Feature: domain Description: SnoaL_4 Location: 119667-120036 bp Feature: domain Description: SnoaL_4 Location: 1 1 9667-1 20036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeaK (cd04336), PRK06498 (isocitrate lyase; Provisional), RVT-GII, GIIM (pfam08388), EthD (pfam07110), SnoaL_4 (pfam13577)

Seq: MURI01000089.1 Burkholderia cenocepacia strain VC10878 VC10878_contig-6000010, whole genome shotgun sequence (61704 bp)
Overview 1 RT 1: 1-4844 bp Neighborhood of RT #1 [1, 4909] COG3547 RVT-GII GIIM AcrR MFS_MMR_MDR_like Feature: gene Location: 1-953 bp Feature: domain Description: COG3547 Location: 16-949 bp Feature: domain Description: COG3547 Location: 16-949 bp Feature: gene Location: 1118-2515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1451-2069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1451-2 069 bp Feature: domain Description: GIIM Note: maturase Location: 2120-2330 bp Feature: domain Description: GIIM Note: maturase Location: 2 12 0-2 330 bp Feature: gene Location: 2605-3243 bp Feature: domain Description: AcrR Location: 2668-3229 bp Feature: domain Description: AcrR Location: 2 668-32 2 9 bp Feature: gene Location: 3389-4909 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3431-4844 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3431-4844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), AcrR (COG1309), MFS_MMR_MDR_like (cd17504)

Seq: MURI01000063.1 Burkholderia cenocepacia strain VC10878 VC10878_contig-7000006, whole genome shotgun sequence (305375 bp)
Overview 1 RT 1: 125888-129703 bp Neighborhood of RT #1 [125888, 129708] Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 125888-126217 bp Feature: domain Description: Histone_HNS Location: 125909-126146 bp Feature: domain Description: Histone_HNS Location: 125909-126146 bp Feature: gene Location: 126364-126570 bp Feature: gene Location: 126543-127892 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127008-127644 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127008-127644 bp Feature: gene Location: 128146-128718 bp Feature: domain Description: FIN Location: 128332-128683 bp Feature: domain Description: FIN Location: 1283 3 2-128683 bp Feature: gene Location: 128953-129708 bp Feature: domain Description: his_ut_repres Location: 129031-129703 bp Feature: domain Description: his_ut_repres Location: 12903 1-129703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)