myRT

myRT report for GCA_001991715.1_ASM199171v1

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Seq: MURD01000076.1 Burkholderia cenocepacia strain VC8945 VC8945_contig-8000007, whole genome shotgun sequence (269298 bp)
Overview 1 RT 1: 125888-129703 bp Neighborhood of RT #1 [125888, 129708] Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 125888-126217 bp Feature: domain Description: Histone_HNS Location: 125909-126146 bp Feature: domain Description: Histone_HNS Location: 1 25909-1 261 46 bp Feature: gene Location: 126364-126570 bp Feature: gene Location: 126543-127892 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127008-127644 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 27008-1 27644 bp Feature: gene Location: 128146-128718 bp Feature: domain Description: FIN Location: 128332-128683 bp Feature: domain Description: FIN Location: 1 28332-1 28683 bp Feature: gene Location: 128953-129708 bp Feature: domain Description: his_ut_repres Location: 129031-129703 bp Feature: domain Description: his_ut_repres Location: 1 29031 -1 29703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: MURD01000082.1 Burkholderia cenocepacia strain VC8945 VC8945_contig-5000008, whole genome shotgun sequence (42879 bp)
Overview 1 RT 1: 33437-39044 bp Neighborhood of RT #1 [33437, 39166] YeaK PRK06498 RVT-GII GIIM EthD EthD SnoaL_4 Feature: gene Location: 33437-33958 bp Feature: domain Description: YeaK Location: 33458-33914 bp Feature: domain Description: YeaK Location: 33458-33914 bp Feature: gene Location: 34365-35948 bp Feature: domain Description: PRK06498 Location: 34368-35946 bp Feature: domain Description: PRK06498 Location: 34368-35946 bp Feature: gene Location: 36547-37788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36739-37357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36739-37357 bp Feature: domain Description: GIIM Note: maturase Location: 37408-37612 bp Feature: domain Description: GIIM Note: maturase Location: 37408-37612 bp Feature: gene Location: 37885-38601 bp Feature: domain Description: EthD Location: 37951-38137 bp Feature: domain Description: EthD Location: 37951-38137 bp Feature: domain Description: EthD Location: 38275-38548 bp Feature: domain Description: EthD Location: 382 75-38548 bp Feature: gene Location: 38654-39166 bp Feature: domain Description: SnoaL_4 Location: 38675-39044 bp Feature: domain Description: SnoaL_4 Location: 38675-39044 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeaK (cd04336), PRK06498 (isocitrate lyase; Provisional), RVT-GII, GIIM (pfam08388), EthD (pfam07110), SnoaL_4 (pfam13577)

Seq: MURD01000014.1 Burkholderia cenocepacia strain VC8945 VC8945_contig-5000001, whole genome shotgun sequence (61716 bp)
Overview 1 RT 1: 1-4874 bp Neighborhood of RT #1 [1, 4939] COG3547 RVT-GII GIIM AcrR MFS_MMR_MDR_like Feature: gene Location: 1-983 bp Feature: domain Description: COG3547 Location: 16-979 bp Feature: domain Description: COG3 547 Location: 16-979 bp Feature: gene Location: 1148-2545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1481-2099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1481-2099 bp Feature: domain Description: GIIM Note: maturase Location: 2150-2360 bp Feature: domain Description: GIIM Note: maturase Location: 2150-23 60 bp Feature: gene Location: 2635-3273 bp Feature: domain Description: AcrR Location: 2698-3259 bp Feature: domain Description: AcrR Location: 2698-3 259 bp Feature: gene Location: 3419-4939 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3461-4874 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3 461-4874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), AcrR (COG1309), MFS_MMR_MDR_like (cd17504)