myRT

myRT report for GCA_001991745.1_ASM199174v1

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Seq: MURF01000101.1 Burkholderia cenocepacia strain VC8947 VC8947_contig-6000009, whole genome shotgun sequence (260239 bp)
Overview 1 RT 1: 126495-130310 bp Neighborhood of RT #1 [126495, 130315] Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 126495-126824 bp Feature: domain Description: Histone_HNS Location: 126516-126753 bp Feature: domain Description: Histone_HNS Location: 1 2651 6-1 26753 bp Feature: gene Location: 126971-127177 bp Feature: gene Location: 127150-128499 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127615-128251 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 2761 5-1 28251 bp Feature: gene Location: 128753-129325 bp Feature: domain Description: FIN Location: 128939-129290 bp Feature: domain Description: FIN Location: 1 28939-1 29290 bp Feature: gene Location: 129560-130315 bp Feature: domain Description: his_ut_repres Location: 129638-130310 bp Feature: domain Description: his_ut_repres Location: 1 29638-1 3031 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: MURF01000109.1 Burkholderia cenocepacia strain VC8947 VC8947_contig-8000010, whole genome shotgun sequence (123820 bp)
Overview 1 RT 1: 3733-9418 bp Neighborhood of RT #1 [3733, 9462] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Feature: gene Location: 3733-4245 bp Feature: domain Description: SnoaL_4 Location: 3754-4123 bp Feature: domain Description: SnoaL_4 Location: 3754-412 3 bp Feature: gene Location: 4298-5014 bp Feature: domain Description: EthD Location: 4364-4550 bp Feature: domain Description: EthD Location: 4364-4550 bp Feature: domain Description: EthD Location: 4688-4961 bp Feature: domain Description: EthD Location: 4688-4961 bp Feature: gene Location: 5111-6352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5303-5921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5303-592 1 bp Feature: domain Description: GIIM Note: maturase Location: 5972-6176 bp Feature: domain Description: GIIM Note: maturase Location: 5972 -6176 bp Feature: gene Location: 6951-8534 bp Feature: domain Description: PRK06498 Location: 6954-8532 bp Feature: domain Description: PRK06498 Location: 6954-8532 bp Feature: gene Location: 8941-9462 bp Feature: domain Description: YeaK Location: 8962-9418 bp Feature: domain Description: YeaK Location: 8962 -9418 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336)

Seq: MURF01000012.1 Burkholderia cenocepacia strain VC8947 VC8947_contig-5000001, whole genome shotgun sequence (61790 bp)
Overview 1 RT 1: 56791-61725 bp Neighborhood of RT #1 [56791, 61781] MFS_MMR_MDR_like AcrR RVT-GII GIIM COG3547 Feature: gene Location: 56791-58311 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56833-58246 bp Feature: domain Description: MFS_MMR_MDR_like Location: 5683 3 -58246 bp Feature: gene Location: 58457-59095 bp Feature: domain Description: AcrR Location: 58520-59081 bp Feature: domain Description: AcrR Location: 58520-59081 bp Feature: gene Location: 59185-60582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59518-60136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59518-6013 6 bp Feature: domain Description: GIIM Note: maturase Location: 60187-60397 bp Feature: domain Description: GIIM Note: maturase Location: 60187-603 97 bp Feature: gene Location: 60747-61781 bp Feature: domain Description: COG3547 Location: 60762-61725 bp Feature: domain Description: COG3 547 Location: 60762-61725 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), AcrR (COG1309), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )