myRT

myRT report for GCA_001991755.1_ASM199175v1

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Seq: MUQZ01000146.1 Burkholderia cenocepacia strain VC15049 VC15049_contig-14000010, whole genome shotgun sequence (246567 bp)
Overview 1 RT 1: 116322-120071 bp Neighborhood of RT #1 [116322, 120142] his_ut_repres FIN RVT-Retrons Histone_HNS Feature: gene Location: 116322-117077 bp Feature: domain Description: his_ut_repres Location: 116400-117072 bp Feature: domain Description: his_ut_repres Location: 1 1 6400-1 1 7072 bp Feature: gene Location: 117312-117884 bp Feature: domain Description: FIN Location: 117498-117849 bp Feature: domain Description: FIN Location: 1 1 7498-1 1 7849 bp Feature: gene Location: 118138-119487 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 118603-119239 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 8603-1 1 9239 bp Feature: gene Location: 119460-119666 bp Feature: gene Location: 119813-120142 bp Feature: domain Description: Histone_HNS Location: 119834-120071 bp Feature: domain Description: Histone_HNS Location: 1 1 9834-1 20071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816)

Seq: MUQZ01000191.1 Burkholderia cenocepacia strain VC15049 VC15049_contig-2000015, whole genome shotgun sequence (61431 bp)
Overview 1 RT 1: 298-5223 bp Neighborhood of RT #1 [298, 5288] COG3547 RVT-GII GIIM AcrR MFS_MMR_MDR_like Feature: gene Location: 298-1332 bp Feature: domain Description: COG3547 Location: 313-1276 bp Feature: domain Description: COG3547 Location: 313-12 76 bp Feature: gene Location: 1497-2894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1830-2448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1830-2 448 bp Feature: domain Description: GIIM Note: maturase Location: 2499-2709 bp Feature: domain Description: GIIM Note: maturase Location: 2 499-2 709 bp Feature: gene Location: 2984-3622 bp Feature: domain Description: AcrR Location: 3047-3608 bp Feature: domain Description: AcrR Location: 3047-3608 bp Feature: gene Location: 3768-5288 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3810-5223 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3810-52 2 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), AcrR (COG1309), MFS_MMR_MDR_like (cd17504)

Seq: MUQZ01000060.1 Burkholderia cenocepacia strain VC15049 VC15049_contig-4000004, whole genome shotgun sequence (25516 bp)
Overview 1 RT 1: 3730-9415 bp Neighborhood of RT #1 [3730, 9459] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Feature: gene Location: 3730-4242 bp Feature: domain Description: SnoaL_4 Location: 3751-4120 bp Feature: domain Description: SnoaL_4 Location: 3 751-4120 bp Feature: gene Location: 4295-5011 bp Feature: domain Description: EthD Location: 4361-4547 bp Feature: domain Description: EthD Location: 43 61-4547 bp Feature: domain Description: EthD Location: 4685-4958 bp Feature: domain Description: EthD Location: 4685-4958 bp Feature: gene Location: 5108-6349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5300-5918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53 00-5918 bp Feature: domain Description: GIIM Note: maturase Location: 5969-6173 bp Feature: domain Description: GIIM Note: maturase Location: 5969-6173 bp Feature: gene Location: 6948-8531 bp Feature: domain Description: PRK06498 Location: 6951-8529 bp Feature: domain Description: PRK06498 Location: 6951-8529 bp Feature: gene Location: 8938-9459 bp Feature: domain Description: YeaK Location: 8959-9415 bp Feature: domain Description: YeaK Location: 8959-9415 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336)