myRT

myRT report for GCA_001991795.1_ASM199179v1

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Seq: MURJ01000061.1 Burkholderia cenocepacia strain VC11575 VC11575_contig-3000006, whole genome shotgun sequence (52200 bp)
Overview 1 RT 1: 32882-38489 bp Neighborhood of RT #1 [32882, 38611] YeaK PRK06498 RVT-GII GIIM EthD EthD SnoaL_4 Feature: gene Location: 32882-33403 bp Feature: domain Description: YeaK Location: 32903-33359 bp Feature: domain Description: YeaK Location: 32903-33359 bp Feature: gene Location: 33810-35393 bp Feature: domain Description: PRK06498 Location: 33813-35391 bp Feature: domain Description: PRK06498 Location: 3381 3-35391 bp Feature: gene Location: 35992-37233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36184-36802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 361 84-36802 bp Feature: domain Description: GIIM Note: maturase Location: 36853-37057 bp Feature: domain Description: GIIM Note: maturase Location: 36853-37057 bp Feature: gene Location: 37330-38046 bp Feature: domain Description: EthD Location: 37396-37582 bp Feature: domain Description: EthD Location: 37396-37582 bp Feature: domain Description: EthD Location: 37720-37993 bp Feature: domain Description: EthD Location: 37720-37993 bp Feature: gene Location: 38099-38611 bp Feature: domain Description: SnoaL_4 Location: 38120-38489 bp Feature: domain Description: SnoaL_4 Location: 381 20-38489 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeaK (cd04336), PRK06498 (isocitrate lyase; Provisional), RVT-GII, GIIM (pfam08388), EthD (pfam07110), SnoaL_4 (pfam13577)

Seq: MURJ01000103.1 Burkholderia cenocepacia strain VC11575 VC11575_contig-11, whole genome shotgun sequence (259923 bp)
Overview 1 RT 1: 130216-133965 bp Neighborhood of RT #1 [130216, 134036] his_ut_repres FIN RVT-Retrons Histone_HNS Feature: gene Location: 130216-130971 bp Feature: domain Description: his_ut_repres Location: 130294-130966 bp Feature: domain Description: his_ut_repres Location: 1302 94-130966 bp Feature: gene Location: 131206-131778 bp Feature: domain Description: FIN Location: 131392-131743 bp Feature: domain Description: FIN Location: 131392 -131743 bp Feature: gene Location: 132032-133381 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132497-133133 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132 497-133133 bp Feature: gene Location: 133354-133560 bp Feature: gene Location: 133707-134036 bp Feature: domain Description: Histone_HNS Location: 133728-133965 bp Feature: domain Description: Histone_HNS Location: 13372 8-133965 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816)

Seq: MURJ01000140.1 Burkholderia cenocepacia strain VC11575 VC11575_contig-4000015, whole genome shotgun sequence (61704 bp)
Overview 1 RT 1: 1-4844 bp Neighborhood of RT #1 [1, 4909] COG3547 RVT-GII GIIM AcrR MFS_MMR_MDR_like Feature: gene Location: 1-953 bp Feature: domain Description: COG3547 Location: 16-949 bp Feature: domain Description: COG3 547 Location: 16-949 bp Feature: gene Location: 1118-2515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1451-2069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1451-2069 bp Feature: domain Description: GIIM Note: maturase Location: 2120-2330 bp Feature: domain Description: GIIM Note: maturase Location: 2120-23 3 0 bp Feature: gene Location: 2605-3243 bp Feature: domain Description: AcrR Location: 2668-3229 bp Feature: domain Description: AcrR Location: 2668-3 229 bp Feature: gene Location: 3389-4909 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3431-4844 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3 43 1-4844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), AcrR (COG1309), MFS_MMR_MDR_like (cd17504)