myRT

myRT report for GCA_001991835.1_ASM199183v1

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Seq: MURL01000036.1 Burkholderia cenocepacia strain VC13450 VC13450_contig-4000002, whole genome shotgun sequence (19481 bp)
Overview 1 RT 1: 4010-9695 bp Neighborhood of RT #1 [4010, 9739] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Feature: gene Location: 4010-4522 bp Feature: domain Description: SnoaL_4 Location: 4031-4400 bp Feature: domain Description: SnoaL_4 Location: 4031 -4400 bp Feature: gene Location: 4575-5291 bp Feature: domain Description: EthD Location: 4641-4827 bp Feature: domain Description: EthD Location: 4641 -4827 bp Feature: domain Description: EthD Location: 4965-5238 bp Feature: domain Description: EthD Location: 4965-5238 bp Feature: gene Location: 5388-6629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5580-6198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5580-61 98 bp Feature: domain Description: GIIM Note: maturase Location: 6249-6453 bp Feature: domain Description: GIIM Note: maturase Location: 6249-6453 bp Feature: gene Location: 7228-8811 bp Feature: domain Description: PRK06498 Location: 7231-8809 bp Feature: domain Description: PRK06498 Location: 7231 -8809 bp Feature: gene Location: 9218-9739 bp Feature: domain Description: YeaK Location: 9239-9695 bp Feature: domain Description: YeaK Location: 9239-9695 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336)

Seq: MURL01000135.1 Burkholderia cenocepacia strain VC13450 VC13450_contig-9000010, whole genome shotgun sequence (193310 bp)
Overview 1 RT 1: 125888-129703 bp Neighborhood of RT #1 [125888, 129708] Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 125888-126217 bp Feature: domain Description: Histone_HNS Location: 125909-126146 bp Feature: domain Description: Histone_HNS Location: 12 5909-12 6146 bp Feature: gene Location: 126364-126570 bp Feature: gene Location: 126543-127892 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127008-127644 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 7008-12 7644 bp Feature: gene Location: 128146-128718 bp Feature: domain Description: FIN Location: 128332-128683 bp Feature: domain Description: FIN Location: 12 8332 -12 8683 bp Feature: gene Location: 128953-129708 bp Feature: domain Description: his_ut_repres Location: 129031-129703 bp Feature: domain Description: his_ut_repres Location: 12 9031-12 9703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: MURL01000072.1 Burkholderia cenocepacia strain VC13450 VC13450_contig-14000004, whole genome shotgun sequence (122545 bp)
Overview 1 RT 1: 59399-65704 bp Neighborhood of RT #1 [59399, 65769] DUF3987 COG3547 RVT-GII GIIM AcrR MFS_MMR_MDR_like Feature: gene Location: 59399-60523 bp Feature: domain Description: DUF3987 Location: 59522-60488 bp Feature: domain Description: DUF3 987 Location: 59522-60488 bp Feature: gene Location: 60779-61813 bp Feature: domain Description: COG3547 Location: 60794-61757 bp Feature: domain Description: COG3 547 Location: 60794-61757 bp Feature: gene Location: 61978-63375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62311-62929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 623 11-62929 bp Feature: domain Description: GIIM Note: maturase Location: 62980-63190 bp Feature: domain Description: GIIM Note: maturase Location: 62980-63 190 bp Feature: gene Location: 63465-64103 bp Feature: domain Description: AcrR Location: 63528-64089 bp Feature: domain Description: AcrR Location: 63 528-64089 bp Feature: gene Location: 64249-65769 bp Feature: domain Description: MFS_MMR_MDR_like Location: 64291-65704 bp Feature: domain Description: MFS_MMR_MDR_like Location: 64291-65704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3987 (pfam13148), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), AcrR (COG1309), MFS_MMR_MDR_like (cd17504)