myRT

myRT report for GCA_001991845.1_ASM199184v1

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Seq: MURN01000048.1 Burkholderia cenocepacia strain VC14543 VC14543_contig-9000003, whole genome shotgun sequence (43158 bp)
Overview 1 RT 1: 3867-9552 bp Neighborhood of RT #1 [3867, 9596] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Feature: gene Location: 3867-4379 bp Feature: domain Description: SnoaL_4 Location: 3888-4257 bp Feature: domain Description: SnoaL_4 Location: 3888-4257 bp Feature: gene Location: 4432-5148 bp Feature: domain Description: EthD Location: 4498-4684 bp Feature: domain Description: EthD Location: 4498-4684 bp Feature: domain Description: EthD Location: 4822-5095 bp Feature: domain Description: EthD Location: 4822-5095 bp Feature: gene Location: 5245-6486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5437-6055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5437-6055 bp Feature: domain Description: GIIM Note: maturase Location: 6106-6310 bp Feature: domain Description: GIIM Note: maturase Location: 61 06-631 0 bp Feature: gene Location: 7085-8668 bp Feature: domain Description: PRK06498 Location: 7088-8666 bp Feature: domain Description: PRK06498 Location: 7088-8666 bp Feature: gene Location: 9075-9596 bp Feature: domain Description: YeaK Location: 9096-9552 bp Feature: domain Description: YeaK Location: 9096-9552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336)

Seq: MURN01000116.1 Burkholderia cenocepacia strain VC14543 VC14543_contig-1000009, whole genome shotgun sequence (61790 bp)
Overview 1 RT 1: 56791-61725 bp Neighborhood of RT #1 [56791, 61781] MFS_MMR_MDR_like AcrR RVT-GII GIIM COG3547 Feature: gene Location: 56791-58311 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56833-58246 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56833-582 46 bp Feature: gene Location: 58457-59095 bp Feature: domain Description: AcrR Location: 58520-59081 bp Feature: domain Description: AcrR Location: 5852 0-59081 bp Feature: gene Location: 59185-60582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59518-60136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59518-60136 bp Feature: domain Description: GIIM Note: maturase Location: 60187-60397 bp Feature: domain Description: GIIM Note: maturase Location: 60187-60397 bp Feature: gene Location: 60747-61781 bp Feature: domain Description: COG3547 Location: 60762-61725 bp Feature: domain Description: COG3547 Location: 60762 -6172 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), AcrR (COG1309), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: MURN01000153.1 Burkholderia cenocepacia strain VC14543 VC14543_contig-11, whole genome shotgun sequence (260494 bp)
Overview 1 RT 1: 130223-133972 bp Neighborhood of RT #1 [130223, 134043] his_ut_repres FIN RVT-Retrons Histone_HNS Feature: gene Location: 130223-130978 bp Feature: domain Description: his_ut_repres Location: 130301-130973 bp Feature: domain Description: his_ut_repres Location: 13 03 01-13 0973 bp Feature: gene Location: 131213-131785 bp Feature: domain Description: FIN Location: 131399-131750 bp Feature: domain Description: FIN Location: 13 13 99-13 1750 bp Feature: gene Location: 132039-133388 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132504-133140 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13 2504-13 3 140 bp Feature: gene Location: 133361-133567 bp Feature: gene Location: 133714-134043 bp Feature: domain Description: Histone_HNS Location: 133735-133972 bp Feature: domain Description: Histone_HNS Location: 13 3 73 5-13 3 972 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816)