myRT

myRT report for GCA_001991935.1_ASM199193v1

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Seq: MURP01000174.1 Burkholderia cenocepacia strain VC15566 VC15566_contig-2000013, whole genome shotgun sequence (262069 bp)
Overview 1 RT 1: 132362-136111 bp Neighborhood of RT #1 [132362, 136182] his_ut_repres FIN RVT-Retrons Histone_HNS Feature: gene Location: 132362-133117 bp Feature: domain Description: his_ut_repres Location: 132440-133112 bp Feature: domain Description: his_ut_repres Location: 1 32440-1 331 1 2 bp Feature: gene Location: 133352-133924 bp Feature: domain Description: FIN Location: 133538-133889 bp Feature: domain Description: FIN Location: 1 33538-1 33889 bp Feature: gene Location: 134178-135527 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 134643-135279 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 34643-1 35279 bp Feature: gene Location: 135500-135706 bp Feature: gene Location: 135853-136182 bp Feature: domain Description: Histone_HNS Location: 135874-136111 bp Feature: domain Description: Histone_HNS Location: 1 35874-1 361 1 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816)

Seq: MURP01000122.1 Burkholderia cenocepacia strain VC15566 VC15566_contig-8000009, whole genome shotgun sequence (13538 bp)
Overview 1 RT 1: 3885-9570 bp Neighborhood of RT #1 [3885, 9614] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Feature: gene Location: 3885-4397 bp Feature: domain Description: SnoaL_4 Location: 3906-4275 bp Feature: domain Description: SnoaL_4 Location: 3906-42 75 bp Feature: gene Location: 4450-5166 bp Feature: domain Description: EthD Location: 4516-4702 bp Feature: domain Description: EthD Location: 4516-4702 bp Feature: domain Description: EthD Location: 4840-5113 bp Feature: domain Description: EthD Location: 4840-5113 bp Feature: gene Location: 5263-6504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5455-6073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5455-6073 bp Feature: domain Description: GIIM Note: maturase Location: 6124-6328 bp Feature: domain Description: GIIM Note: maturase Location: 612 4-632 8 bp Feature: gene Location: 7103-8686 bp Feature: domain Description: PRK06498 Location: 7106-8684 bp Feature: domain Description: PRK06498 Location: 7106-8684 bp Feature: gene Location: 9093-9614 bp Feature: domain Description: YeaK Location: 9114-9570 bp Feature: domain Description: YeaK Location: 9114-9570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336)

Seq: MURP01000118.1 Burkholderia cenocepacia strain VC15566 VC15566_contig-4000009, whole genome shotgun sequence (61783 bp)
Overview 1 RT 1: 56784-61718 bp Neighborhood of RT #1 [56784, 61774] MFS_MMR_MDR_like AcrR RVT-GII GIIM COG3547 Feature: gene Location: 56784-58304 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56826-58239 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56826-5823 9 bp Feature: gene Location: 58450-59088 bp Feature: domain Description: AcrR Location: 58513-59074 bp Feature: domain Description: AcrR Location: 58513 -59074 bp Feature: gene Location: 59178-60575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59511-60129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59511-60129 bp Feature: domain Description: GIIM Note: maturase Location: 60180-60390 bp Feature: domain Description: GIIM Note: maturase Location: 60180-603 90 bp Feature: gene Location: 60740-61774 bp Feature: domain Description: COG3547 Location: 60755-61718 bp Feature: domain Description: COG3 547 Location: 60755-61718 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), AcrR (COG1309), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )