myRT

myRT report for GCA_001992035.1_ASM199203v1

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Seq: MURG01000025.1 Burkholderia cenocepacia strain VC9670 VC9670_contig-2000002, whole genome shotgun sequence (90569 bp)
Overview 1 RT 1: 12396-16145 bp Neighborhood of RT #1 [12396, 16216] his_ut_repres FIN RVT-Retrons Histone_HNS Feature: gene Location: 12396-13151 bp Feature: domain Description: his_ut_repres Location: 12474-13146 bp Feature: domain Description: his_ut_repres Location: 1 2474-1 31 46 bp Feature: gene Location: 13386-13958 bp Feature: domain Description: FIN Location: 13572-13923 bp Feature: domain Description: FIN Location: 1 3572-1 3923 bp Feature: gene Location: 14212-15561 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14677-15313 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 4677-1 531 3 bp Feature: gene Location: 15534-15740 bp Feature: gene Location: 15887-16216 bp Feature: domain Description: Histone_HNS Location: 15908-16145 bp Feature: domain Description: Histone_HNS Location: 1 5908-1 61 45 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816)

Seq: MURG01000078.1 Burkholderia cenocepacia strain VC9670 VC9670_contig-2000007, whole genome shotgun sequence (123975 bp)
Overview 1 RT 1: 114424-120031 bp Neighborhood of RT #1 [114424, 120153] YeaK PRK06498 RVT-GII GIIM EthD EthD SnoaL_4 Feature: gene Location: 114424-114945 bp Feature: domain Description: YeaK Location: 114445-114901 bp Feature: domain Description: YeaK Location: 114445-114901 bp Feature: gene Location: 115352-116935 bp Feature: domain Description: PRK06498 Location: 115355-116933 bp Feature: domain Description: PRK06498 Location: 115355-116933 bp Feature: gene Location: 117534-118775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117726-118344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11772 6-118344 bp Feature: domain Description: GIIM Note: maturase Location: 118395-118599 bp Feature: domain Description: GIIM Note: maturase Location: 118395-118599 bp Feature: gene Location: 118872-119588 bp Feature: domain Description: EthD Location: 118938-119124 bp Feature: domain Description: EthD Location: 118938-11912 4 bp Feature: domain Description: EthD Location: 119262-119535 bp Feature: domain Description: EthD Location: 1192 62 -119535 bp Feature: gene Location: 119641-120153 bp Feature: domain Description: SnoaL_4 Location: 119662-120031 bp Feature: domain Description: SnoaL_4 Location: 119662 -12 0031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeaK (cd04336), PRK06498 (isocitrate lyase; Provisional), RVT-GII, GIIM (pfam08388), EthD (pfam07110), SnoaL_4 (pfam13577)

Seq: MURG01000088.1 Burkholderia cenocepacia strain VC9670 VC9670_contig-12000007, whole genome shotgun sequence (122584 bp)
Overview 1 RT 1: 56801-63088 bp Neighborhood of RT #1 [56801, 63123] MFS_MMR_MDR_like AcrR RVT-GII GIIM COG3547 DUF3987 Feature: gene Location: 56801-58321 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56843-58256 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56843 -58256 bp Feature: gene Location: 58467-59105 bp Feature: domain Description: AcrR Location: 58530-59091 bp Feature: domain Description: AcrR Location: 5853 0-59091 bp Feature: gene Location: 59195-60592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59528-60146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59528-60146 bp Feature: domain Description: GIIM Note: maturase Location: 60197-60407 bp Feature: domain Description: GIIM Note: maturase Location: 60197-60407 bp Feature: gene Location: 60757-61791 bp Feature: domain Description: COG3547 Location: 60772-61735 bp Feature: domain Description: COG3 547 Location: 60772-6173 5 bp Feature: gene Location: 62047-63123 bp Feature: domain Description: DUF3987 Location: 62122-63088 bp Feature: domain Description: DUF3 987 Location: 62122-63 088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), AcrR (COG1309), RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), DUF3987 (pfam13148)