myRT

myRT report for GCA_001992195.1_ASM199219v1

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Seq: MUSM01000039.1 Burkholderia cenocepacia strain VC12229 VC12229_contig-4, whole genome shotgun sequence (123669 bp)
Overview 1 RT 1: 3725-9412 bp Neighborhood of RT #1 [3725, 9456] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Feature: gene Location: 3725-4237 bp Feature: domain Description: SnoaL_4 Location: 3746-4115 bp Feature: domain Description: SnoaL_4 Location: 3746-41 1 5 bp Feature: gene Location: 4290-5006 bp Feature: domain Description: EthD Location: 4356-4542 bp Feature: domain Description: EthD Location: 4356-4542 bp Feature: domain Description: EthD Location: 4680-4953 bp Feature: domain Description: EthD Location: 4680-4953 bp Feature: gene Location: 5103-6482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5433-6051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5433-6051 bp Feature: domain Description: GIIM Note: maturase Location: 6102-6306 bp Feature: domain Description: GIIM Note: maturase Location: 61 02-6306 bp Feature: gene Location: 6945-8528 bp Feature: domain Description: PRK06498 Location: 6948-8526 bp Feature: domain Description: PRK06498 Location: 6948-8526 bp Feature: gene Location: 8935-9456 bp Feature: domain Description: YeaK Location: 8956-9412 bp Feature: domain Description: YeaK Location: 8956-941 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336)

Seq: MUSM01000087.1 Burkholderia cenocepacia strain VC12229 VC12229_contig-4000008, whole genome shotgun sequence (61776 bp)
Overview 1 RT 1: 56777-61711 bp Neighborhood of RT #1 [56777, 61767] MFS_MMR_MDR_like AcrR RVT-GII GIIM COG3547 Feature: gene Location: 56777-58297 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56819-58232 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56819-582 32 bp Feature: gene Location: 58443-59081 bp Feature: domain Description: AcrR Location: 58506-59067 bp Feature: domain Description: AcrR Location: 58506-59067 bp Feature: gene Location: 59171-60568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59504-60122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59504-6012 2 bp Feature: domain Description: GIIM Note: maturase Location: 60173-60383 bp Feature: domain Description: GIIM Note: maturase Location: 60173-60383 bp Feature: gene Location: 60733-61767 bp Feature: domain Description: COG3547 Location: 60748-61711 bp Feature: domain Description: COG3547 Location: 60748-61711 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), AcrR (COG1309), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: MUSM01000131.1 Burkholderia cenocepacia strain VC12229 VC12229_contig-10000012, whole genome shotgun sequence (164671 bp)
Overview 1 RT 1: 34027-37776 bp Neighborhood of RT #1 [34027, 37847] his_ut_repres FIN RVT-Retrons Histone_HNS Feature: gene Location: 34027-34782 bp Feature: domain Description: his_ut_repres Location: 34105-34777 bp Feature: domain Description: his_ut_repres Location: 3 4105-3 4777 bp Feature: gene Location: 35017-35589 bp Feature: domain Description: FIN Location: 35203-35554 bp Feature: domain Description: FIN Location: 3 5203 -3 5554 bp Feature: gene Location: 35843-37192 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36308-36944 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 63 08-3 6944 bp Feature: gene Location: 37165-37371 bp Feature: gene Location: 37518-37847 bp Feature: domain Description: Histone_HNS Location: 37539-37776 bp Feature: domain Description: Histone_HNS Location: 3 753 9-3 7776 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816)