myRT

myRT report for GCA_001992205.1_ASM199220v1

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Seq: MUSQ01000152.1 Burkholderia cenocepacia strain VC14637 VC14637_contig-3000011, whole genome shotgun sequence (61773 bp)
Overview 1 RT 1: 56774-61708 bp Neighborhood of RT #1 [56774, 61764] MFS_MMR_MDR_like AcrR RVT-GII GIIM COG3547 Feature: gene Location: 56774-58294 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56816-58229 bp Feature: domain Description: MFS_MMR_MDR_like Location: 5681 6-58229 bp Feature: gene Location: 58440-59078 bp Feature: domain Description: AcrR Location: 58503-59064 bp Feature: domain Description: AcrR Location: 58503-59064 bp Feature: gene Location: 59168-60565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59501-60119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59501 -601 1 9 bp Feature: domain Description: GIIM Note: maturase Location: 60170-60380 bp Feature: domain Description: GIIM Note: maturase Location: 601 70-60380 bp Feature: gene Location: 60730-61764 bp Feature: domain Description: COG3547 Location: 60745-61708 bp Feature: domain Description: COG3547 Location: 60745-61 708 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), AcrR (COG1309), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: MUSQ01000125.1 Burkholderia cenocepacia strain VC14637 VC14637_contig-2000008, whole genome shotgun sequence (163800 bp)
Overview 1 RT 1: 125899-129714 bp Neighborhood of RT #1 [125899, 129719] Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 125899-126228 bp Feature: domain Description: Histone_HNS Location: 125920-126157 bp Feature: domain Description: Histone_HNS Location: 12 592 0-12 6157 bp Feature: gene Location: 126375-126581 bp Feature: gene Location: 126554-127903 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127019-127655 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 7019-12 7655 bp Feature: gene Location: 128157-128729 bp Feature: domain Description: FIN Location: 128343-128694 bp Feature: domain Description: FIN Location: 12 8343-12 8694 bp Feature: gene Location: 128964-129719 bp Feature: domain Description: his_ut_repres Location: 129042-129714 bp Feature: domain Description: his_ut_repres Location: 12 9042 -12 9714 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: MUSQ01000112.1 Burkholderia cenocepacia strain VC14637 VC14637_contig-1000007, whole genome shotgun sequence (122307 bp)
Overview 1 RT 1: 3709-9397 bp Neighborhood of RT #1 [3709, 9441] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Feature: gene Location: 3709-4221 bp Feature: domain Description: SnoaL_4 Location: 3730-4099 bp Feature: domain Description: SnoaL_4 Location: 3 73 0-4099 bp Feature: gene Location: 4274-4990 bp Feature: domain Description: EthD Location: 4340-4526 bp Feature: domain Description: EthD Location: 43 40-4526 bp Feature: domain Description: EthD Location: 4664-4937 bp Feature: domain Description: EthD Location: 4664-493 7 bp Feature: gene Location: 5087-6328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5279-5897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5279-5897 bp Feature: domain Description: GIIM Note: maturase Location: 5948-6152 bp Feature: domain Description: GIIM Note: maturase Location: 5948-6152 bp Feature: gene Location: 6930-8513 bp Feature: domain Description: PRK06498 Location: 6933-8511 bp Feature: domain Description: PRK06498 Location: 693 3 -8511 bp Feature: gene Location: 8920-9441 bp Feature: domain Description: YeaK Location: 8941-9397 bp Feature: domain Description: YeaK Location: 8941-93 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336)