myRT

myRT report for GCA_001992315.1_ASM199231v1

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Seq: MUTC01000044.1 Burkholderia cenocepacia strain VC7530 VC7530_contig-7000004, whole genome shotgun sequence (61761 bp)
Overview 1 RT 1: 56762-61696 bp Neighborhood of RT #1 [56762, 61752] MFS_MMR_MDR_like AcrR RVT-GII GIIM COG3547 Feature: gene Location: 56762-58282 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56804-58217 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56804-5821 7 bp Feature: gene Location: 58428-59066 bp Feature: domain Description: AcrR Location: 58491-59052 bp Feature: domain Description: AcrR Location: 58491 -59052 bp Feature: gene Location: 59156-60553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59489-60107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59489-601 07 bp Feature: domain Description: GIIM Note: maturase Location: 60158-60368 bp Feature: domain Description: GIIM Note: maturase Location: 601 58-60368 bp Feature: gene Location: 60718-61752 bp Feature: domain Description: COG3547 Location: 60733-61696 bp Feature: domain Description: COG3547 Location: 60733-61 696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), AcrR (COG1309), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: MUTC01000079.1 Burkholderia cenocepacia strain VC7530 VC7530_contig-1000007, whole genome shotgun sequence (295485 bp)
Overview 1 RT 1: 125888-129703 bp Neighborhood of RT #1 [125888, 129708] Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 125888-126217 bp Feature: domain Description: Histone_HNS Location: 125909-126146 bp Feature: domain Description: Histone_HNS Location: 12 5909-12 6146 bp Feature: gene Location: 126364-126570 bp Feature: gene Location: 126543-127892 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127008-127644 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 7008-12 7644 bp Feature: gene Location: 128146-128718 bp Feature: domain Description: FIN Location: 128332-128683 bp Feature: domain Description: FIN Location: 12 8332 -12 8683 bp Feature: gene Location: 128953-129708 bp Feature: domain Description: his_ut_repres Location: 129031-129703 bp Feature: domain Description: his_ut_repres Location: 12 9031-12 9703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: MUTC01000011.1 Burkholderia cenocepacia strain VC7530 VC7530_contig-3000001, whole genome shotgun sequence (123892 bp)
Overview 1 RT 1: 3720-9405 bp Neighborhood of RT #1 [3720, 9449] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Feature: gene Location: 3720-4232 bp Feature: domain Description: SnoaL_4 Location: 3741-4110 bp Feature: domain Description: SnoaL_4 Location: 3 741-4110 bp Feature: gene Location: 4285-5001 bp Feature: domain Description: EthD Location: 4351-4537 bp Feature: domain Description: EthD Location: 43 51-453 7 bp Feature: domain Description: EthD Location: 4675-4948 bp Feature: domain Description: EthD Location: 4675-4948 bp Feature: gene Location: 5098-6339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5290-5908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5290-5908 bp Feature: domain Description: GIIM Note: maturase Location: 5959-6163 bp Feature: domain Description: GIIM Note: maturase Location: 5959-6163 bp Feature: gene Location: 6938-8521 bp Feature: domain Description: PRK06498 Location: 6941-8519 bp Feature: domain Description: PRK06498 Location: 6941-8519 bp Feature: gene Location: 8928-9449 bp Feature: domain Description: YeaK Location: 8949-9405 bp Feature: domain Description: YeaK Location: 8949-9405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336)