myRT

myRT report for GCA_001992345.1_ASM199234v1

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Seq: MUTF01000002.1 Burkholderia cenocepacia strain VC11261 VC11261_contig-1000000, whole genome shotgun sequence (19243 bp)
Overview 1 RT 1: 9782-15389 bp Neighborhood of RT #1 [9782, 15511] YeaK PRK06498 RVT-GII GIIM EthD EthD SnoaL_4 Feature: gene Location: 9782-10303 bp Feature: domain Description: YeaK Location: 9803-10259 bp Feature: domain Description: YeaK Location: 9803-1 0259 bp Feature: gene Location: 10710-12293 bp Feature: domain Description: PRK06498 Location: 10713-12291 bp Feature: domain Description: PRK06498 Location: 1 071 3-1 2291 bp Feature: gene Location: 12892-14133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13084-13702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3084-1 3702 bp Feature: domain Description: GIIM Note: maturase Location: 13753-13957 bp Feature: domain Description: GIIM Note: maturase Location: 1 3753-1 3957 bp Feature: gene Location: 14230-14946 bp Feature: domain Description: EthD Location: 14296-14482 bp Feature: domain Description: EthD Location: 1 4296-1 4482 bp Feature: domain Description: EthD Location: 14620-14893 bp Feature: domain Description: EthD Location: 1 4620-1 4893 bp Feature: gene Location: 14999-15511 bp Feature: domain Description: SnoaL_4 Location: 15020-15389 bp Feature: domain Description: SnoaL_4 Location: 1 5020-1 5389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06498 (isocitrate lyase; Provisional), RVT-GII, GIIM (pfam08388), EthD (pfam07110), SnoaL_4 (pfam13577), YeaK (cd04336)

Seq: MUTF01000079.1 Burkholderia cenocepacia strain VC11261 VC11261_contig-11, whole genome shotgun sequence (263932 bp)
Overview 1 RT 1: 134225-137974 bp Neighborhood of RT #1 [134225, 138045] his_ut_repres FIN RVT-Retrons Histone_HNS Feature: gene Location: 134225-134980 bp Feature: domain Description: his_ut_repres Location: 134303-134975 bp Feature: domain Description: his_ut_repres Location: 134303-134975 bp Feature: gene Location: 135215-135787 bp Feature: domain Description: FIN Location: 135401-135752 bp Feature: domain Description: FIN Location: 135401-135752 bp Feature: gene Location: 136041-137390 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 136506-137142 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 136506-137142 bp Feature: gene Location: 137363-137569 bp Feature: gene Location: 137716-138045 bp Feature: domain Description: Histone_HNS Location: 137737-137974 bp Feature: domain Description: Histone_HNS Location: 137737-137974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816)

Seq: MUTF01000109.1 Burkholderia cenocepacia strain VC11261 VC11261_contig-3000015, whole genome shotgun sequence (61796 bp)
Overview 1 RT 1: 10-4935 bp Neighborhood of RT #1 [10, 5000] COG3547 RVT-GII GIIM AcrR MFS_MMR_MDR_like Feature: gene Location: 10-1044 bp Feature: domain Description: COG3547 Location: 25-988 bp Feature: domain Description: COG3 547 Location: 25-988 bp Feature: gene Location: 1209-2606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1542-2160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1542-2160 bp Feature: domain Description: GIIM Note: maturase Location: 2211-2421 bp Feature: domain Description: GIIM Note: maturase Location: 2211-2421 bp Feature: gene Location: 2696-3334 bp Feature: domain Description: AcrR Location: 2759-3320 bp Feature: domain Description: AcrR Location: 2759-3 3 20 bp Feature: gene Location: 3480-5000 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3522-4935 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3 522-493 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), AcrR (COG1309), MFS_MMR_MDR_like (cd17504)