myRT

myRT report for GCA_001992385.1_ASM199238v1

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Seq: MUTK01000011.1 Burkholderia cenocepacia strain VC15305 VC15305_contig-1000001, whole genome shotgun sequence (123819 bp)
Overview 1 RT 1: 3731-9416 bp Neighborhood of RT #1 [3731, 9460] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Feature: gene Location: 3731-4243 bp Feature: domain Description: SnoaL_4 Location: 3752-4121 bp Feature: domain Description: SnoaL_4 Location: 3752-41 21 bp Feature: gene Location: 4296-5012 bp Feature: domain Description: EthD Location: 4362-4548 bp Feature: domain Description: EthD Location: 4362-4548 bp Feature: domain Description: EthD Location: 4686-4959 bp Feature: domain Description: EthD Location: 4686-4959 bp Feature: gene Location: 5109-6350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5301-5919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5301 -591 9 bp Feature: domain Description: GIIM Note: maturase Location: 5970-6174 bp Feature: domain Description: GIIM Note: maturase Location: 5970-61 74 bp Feature: gene Location: 6949-8532 bp Feature: domain Description: PRK06498 Location: 6952-8530 bp Feature: domain Description: PRK06498 Location: 6952-8530 bp Feature: gene Location: 8939-9460 bp Feature: domain Description: YeaK Location: 8960-9416 bp Feature: domain Description: YeaK Location: 8960-941 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336)

Seq: MUTK01000007.1 Burkholderia cenocepacia strain VC15305 VC15305_contig-6000000, whole genome shotgun sequence (61788 bp)
Overview 1 RT 1: 56789-61723 bp Neighborhood of RT #1 [56789, 61779] MFS_MMR_MDR_like AcrR RVT-GII GIIM COG3547 Feature: gene Location: 56789-58309 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56831-58244 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56831-582 44 bp Feature: gene Location: 58455-59093 bp Feature: domain Description: AcrR Location: 58518-59079 bp Feature: domain Description: AcrR Location: 58518-59079 bp Feature: gene Location: 59183-60580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59516-60134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59516-60134 bp Feature: domain Description: GIIM Note: maturase Location: 60185-60395 bp Feature: domain Description: GIIM Note: maturase Location: 60185-60395 bp Feature: gene Location: 60745-61779 bp Feature: domain Description: COG3547 Location: 60760-61723 bp Feature: domain Description: COG3547 Location: 60760-6172 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), AcrR (COG1309), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: MUTK01000087.1 Burkholderia cenocepacia strain VC15305 VC15305_contig-4000011, whole genome shotgun sequence (269298 bp)
Overview 1 RT 1: 125888-129703 bp Neighborhood of RT #1 [125888, 129708] Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 125888-126217 bp Feature: domain Description: Histone_HNS Location: 125909-126146 bp Feature: domain Description: Histone_HNS Location: 125909-126146 bp Feature: gene Location: 126364-126570 bp Feature: gene Location: 126543-127892 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127008-127644 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127008-127644 bp Feature: gene Location: 128146-128718 bp Feature: domain Description: FIN Location: 128332-128683 bp Feature: domain Description: FIN Location: 1283 3 2-128683 bp Feature: gene Location: 128953-129708 bp Feature: domain Description: his_ut_repres Location: 129031-129703 bp Feature: domain Description: his_ut_repres Location: 12903 1-129703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)