myRT

myRT report for GCA_001992395.1_ASM199239v1

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Seq: MUTI01000136.1 Burkholderia cenocepacia strain VC14761 VC14761_contig-10000015, whole genome shotgun sequence (116961 bp)
Overview 1 RT 1: 3711-9396 bp Neighborhood of RT #1 [3711, 9440] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Feature: gene Location: 3711-4223 bp Feature: domain Description: SnoaL_4 Location: 3732-4101 bp Feature: domain Description: SnoaL_4 Location: 3732-41 01 bp Feature: gene Location: 4276-4992 bp Feature: domain Description: EthD Location: 4342-4528 bp Feature: domain Description: EthD Location: 4342-4528 bp Feature: domain Description: EthD Location: 4666-4939 bp Feature: domain Description: EthD Location: 4666-4939 bp Feature: gene Location: 5089-6330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5281-5899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5281 -5899 bp Feature: domain Description: GIIM Note: maturase Location: 5950-6154 bp Feature: domain Description: GIIM Note: maturase Location: 5950-61 54 bp Feature: gene Location: 6929-8512 bp Feature: domain Description: PRK06498 Location: 6932-8510 bp Feature: domain Description: PRK06498 Location: 6932-851 0 bp Feature: gene Location: 8919-9440 bp Feature: domain Description: YeaK Location: 8940-9396 bp Feature: domain Description: YeaK Location: 8940-9396 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336)

Seq: MUTI01000093.1 Burkholderia cenocepacia strain VC14761 VC14761_contig-7000010, whole genome shotgun sequence (399246 bp)
Overview 1 RT 1: 139424-143173 bp Neighborhood of RT #1 [139424, 143244] his_ut_repres FIN RVT-Retrons Histone_HNS Feature: gene Location: 139424-140179 bp Feature: domain Description: his_ut_repres Location: 139502-140174 bp Feature: domain Description: his_ut_repres Location: 139502 -140174 bp Feature: gene Location: 140414-140986 bp Feature: domain Description: FIN Location: 140600-140951 bp Feature: domain Description: FIN Location: 140600-140951 bp Feature: gene Location: 141240-142589 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 141705-142341 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 141705-142 341 bp Feature: gene Location: 142562-142768 bp Feature: gene Location: 142915-143244 bp Feature: domain Description: Histone_HNS Location: 142936-143173 bp Feature: domain Description: Histone_HNS Location: 142 936-143173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816)

Seq: MUTI01000060.1 Burkholderia cenocepacia strain VC14761 VC14761_contig-2000007, whole genome shotgun sequence (61790 bp)
Overview 1 RT 1: 10-4935 bp Neighborhood of RT #1 [10, 5000] COG3547 RVT-GII GIIM AcrR MFS_MMR_MDR_like Feature: gene Location: 10-1044 bp Feature: domain Description: COG3547 Location: 25-988 bp Feature: domain Description: COG3 547 Location: 25-988 bp Feature: gene Location: 1209-2606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1542-2160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1542-2160 bp Feature: domain Description: GIIM Note: maturase Location: 2211-2421 bp Feature: domain Description: GIIM Note: maturase Location: 2211-2421 bp Feature: gene Location: 2696-3334 bp Feature: domain Description: AcrR Location: 2759-3320 bp Feature: domain Description: AcrR Location: 2759-3 3 20 bp Feature: gene Location: 3480-5000 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3522-4935 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3 522-493 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), AcrR (COG1309), MFS_MMR_MDR_like (cd17504)