myRT

myRT report for GCA_001992615.1_ASM199261v1

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Seq: MUTY01000005.1 Burkholderia cenocepacia strain VC7849 VC7849_contig-4000000, whole genome shotgun sequence (52074 bp)
Overview 1 RT 1: 48811-51916 bp Neighborhood of RT #1 [48811, 52074] Gmd GDP_MD_SDR_e RVT-GII GIIM Feature: gene Location: 48811-49857 bp Feature: domain Description: Gmd Location: 48826-49843 bp Feature: domain Description: Gmd Location: 48826-49843 bp Feature: gene Location: 49844-50809 bp Feature: domain Description: GDP_MD_SDR_e Location: 49880-50774 bp Feature: domain Description: GDP_MD_SDR_e Location: 49880-50774 bp Feature: gene Location: 50929-52074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51040-51655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 040-51 655 bp Feature: domain Description: GIIM Note: maturase Location: 51715-51916 bp Feature: domain Description: GIIM Note: maturase Location: 51 71 5-51 91 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Gmd (COG1089), GDP_MD_SDR_e (cd05260), RVT-GII, GIIM (pfam08388)

Seq: MUTY01000090.1 Burkholderia cenocepacia strain VC7849 VC7849_contig-9000010, whole genome shotgun sequence (266438 bp)
Overview 1 RT 1: 127175-132433 bp Neighborhood of RT #1 [127175, 132456] his_ut_repres FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 127175-127930 bp Feature: domain Description: his_ut_repres Location: 127253-127925 bp Feature: domain Description: his_ut_repres Location: 12 72 53-12 792 5 bp Feature: gene Location: 128153-128725 bp Feature: domain Description: FIN Location: 128333-128690 bp Feature: domain Description: FIN Location: 12 8333-12 8690 bp Feature: gene Location: 128978-130327 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 129443-130079 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 9443-130079 bp Feature: gene Location: 130646-130975 bp Feature: domain Description: Histone_HNS Location: 130667-130904 bp Feature: domain Description: Histone_HNS Location: 130667-130904 bp Feature: gene Location: 131209-132456 bp Feature: domain Description: MFS_MucK Location: 131299-132433 bp Feature: domain Description: MFS_MucK Location: 1312 99-132 433 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)

Seq: MUTY01000014.1 Burkholderia cenocepacia strain VC7849 VC7849_contig-6000001, whole genome shotgun sequence (24217 bp)
Overview 1 RT 1: 1-5577 bp Neighborhood of RT #1 [1, 5627] RVT-GII GIIM MscK MFS_SV2_like Feature: gene Location: 1-1146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112-727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112-727 bp Feature: domain Description: GIIM Note: maturase Location: 787-988 bp Feature: domain Description: GIIM Note: maturase Location: 787-988 bp Feature: gene Location: 1290-3752 bp Feature: domain Description: MscK Location: 1386-3708 bp Feature: domain Description: MscK Location: 13 86-3 708 bp Feature: gene Location: 4209-5627 bp Feature: domain Description: MFS_SV2_like Location: 4329-5577 bp Feature: domain Description: MFS_SV2_like Location: 43 29-5577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), MscK (COG3264), MFS_SV2_like (cd17316)

Seq: MUTY01000050.1 Burkholderia cenocepacia strain VC7849 VC7849_contig-7000005, whole genome shotgun sequence (5159 bp)
Overview 1 RT 1: 1-2608 bp Neighborhood of RT #1 [1, 2616] RVT-GII GIIM RsmI PRK14673 Feature: gene Location: 1-1146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112-727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112-727 bp Feature: domain Description: GIIM Note: maturase Location: 787-988 bp Feature: domain Description: GIIM Note: maturase Location: 787-988 bp Feature: gene Location: 1254-2141 bp Feature: domain Description: RsmI Location: 1302-2115 bp Feature: domain Description: RsmI Location: 1302-2115 bp Feature: gene Location: 2140-2616 bp Feature: domain Description: PRK14673 Location: 2191-2608 bp Feature: domain Description: PRK14 673 Location: 2191-2608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RsmI (COG0313), PRK14673 (hypothetical protein; Provisional)