myRT

myRT report for GCA_001993005.1_ASM199300v1

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Seq: MUVF01000062.1 Burkholderia cenocepacia strain VC7393 VC7393_contig-7000005, whole genome shotgun sequence (9663 bp)
Overview 1 RT 1: 5303-9053 bp Neighborhood of RT #1 [5303, 9484] SRAP RVT-GII Feature: gene Location: 5303-6289 bp Feature: gene Location: 6985-7896 bp Feature: domain Description: SRAP Location: 7345-7861 bp Feature: domain Description: SRAP Location: 7345-7861 bp Feature: gene Location: 7952-9484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8363-9053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8363-9053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SRAP (pfam02586), RVT-GII

Seq: MUVF01000169.1 Burkholderia cenocepacia strain VC7393 VC7393_contig-10000013, whole genome shotgun sequence (169039 bp)
Overview 1 RT 1: 49185-52934 bp Neighborhood of RT #1 [49185, 53005] his_ut_repres FIN RVT-Retrons Histone_HNS Feature: gene Location: 49185-49940 bp Feature: domain Description: his_ut_repres Location: 49263-49935 bp Feature: domain Description: his_ut_repres Location: 492 63-49935 bp Feature: gene Location: 50175-50747 bp Feature: domain Description: FIN Location: 50361-50712 bp Feature: domain Description: FIN Location: 50361-50712 bp Feature: gene Location: 51001-52350 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51466-52102 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51466-52 102 bp Feature: gene Location: 52323-52529 bp Feature: gene Location: 52676-53005 bp Feature: domain Description: Histone_HNS Location: 52697-52934 bp Feature: domain Description: Histone_HNS Location: 52 697-52 934 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816)

Seq: MUVF01000180.1 Burkholderia cenocepacia strain VC7393 VC7393_contig-9000014, whole genome shotgun sequence (102134 bp)
Overview 1 RT 1: 205-2703 bp Neighborhood of RT #1 [205, 2720] PRK09409 RVT-GII TnpB_IS66 Feature: gene Location: 205-1092 bp Feature: domain Description: PRK09409 Location: 208-1075 bp Feature: domain Description: PRK09409 Location: 208-1075 bp Feature: gene Location: 1123-2058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1534-2050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153 4-2050 bp Feature: gene Location: 2062-2384 bp Feature: gene Location: 2388-2720 bp Feature: domain Description: TnpB_IS66 Location: 2415-2703 bp Feature: domain Description: TnpB_IS66 Location: 2415-2703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK09409 (IS2 transposase TnpB; Reviewed), TnpB_IS66 (pfam05717)

Seq: MUVF01000090.1 Burkholderia cenocepacia strain VC7393 VC7393_contig-5000007, whole genome shotgun sequence (62589 bp)
Overview 1 RT 1: 166-5959 bp Neighborhood of RT #1 [166, 6006] RVT-GII GIIM MscK MFS_SV2_like Feature: gene Location: 166-1533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 499-1114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 99-1114 bp Feature: domain Description: GIIM Note: maturase Location: 1174-1375 bp Feature: domain Description: GIIM Note: maturase Location: 1174 -1375 bp Feature: gene Location: 1677-4139 bp Feature: domain Description: MscK Location: 1755-4098 bp Feature: domain Description: MscK Location: 1755-4 098 bp Feature: gene Location: 4588-6006 bp Feature: domain Description: MFS_SV2_like Location: 4708-5959 bp Feature: domain Description: MFS_SV2_like Location: 4 708-5959 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), MscK (COG3264), MFS_SV2_like (cd17316)

Seq: MUVF01000037.1 Burkholderia cenocepacia strain VC7393 VC7393_contig-12000002, whole genome shotgun sequence (101566 bp)
Overview 1 RT 1: 45279-50563 bp Neighborhood of RT #1 [45279, 50577] COG3547 RVT-GII GIIM GDP_MD_SDR_e Gmd Feature: gene Location: 45279-45578 bp Feature: gene Location: 45887-46921 bp Feature: domain Description: COG3547 Location: 45902-46865 bp Feature: domain Description: COG35 47 Location: 45 902-46865 bp Feature: gene Location: 47092-48459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47425-48040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47425 -48040 bp Feature: domain Description: GIIM Note: maturase Location: 48100-48301 bp Feature: domain Description: GIIM Note: maturase Location: 48100-48301 bp Feature: gene Location: 48579-49544 bp Feature: domain Description: GDP_MD_SDR_e Location: 48615-49512 bp Feature: domain Description: GDP_MD_SDR_e Location: 48615 -495 12 bp Feature: gene Location: 49531-50577 bp Feature: domain Description: Gmd Location: 49546-50563 bp Feature: domain Description: Gmd Location: 495 46-5 05 63 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), GDP_MD_SDR_e (cd05260), Gmd (COG1089)

Seq: MUVF01000140.1 Burkholderia cenocepacia strain VC7393 VC7393_contig-3000011, whole genome shotgun sequence (93003 bp)
Overview 1 RT 1: 43856-48439 bp Neighborhood of RT #1 [43856, 48439] D RVT-GII Feature: gene Location: 43856-44926 bp Feature: domain Description: D Location: 43910-44894 bp Feature: domain Description: D Location: 43910-44894 bp Feature: gene Location: 45114-45410 bp Feature: gene Location: 45538-47070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45949-46639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45949-46 6 39 bp Feature: gene Location: 47642-48061 bp Feature: gene Location: 48224-48439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT D (PHA02561), RVT-GII