myRT

myRT report for GCA_001993295.1_ASM199329v1

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Seq: MUSP01000051.1 Burkholderia cenocepacia strain VC14636 VC14636_contig-4000006, whole genome shotgun sequence (209856 bp)
Overview 1 RT 1: 172011-175826 bp Neighborhood of RT #1 [172011, 175831] Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 172011-172340 bp Feature: domain Description: Histone_HNS Location: 172032-172269 bp Feature: domain Description: Histone_HNS Location: 1 72032-1 72269 bp Feature: gene Location: 172487-172693 bp Feature: gene Location: 172666-174015 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 173131-173767 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 731 31 -1 73767 bp Feature: gene Location: 174269-174841 bp Feature: domain Description: FIN Location: 174455-174806 bp Feature: domain Description: FIN Location: 1 74455-1 74806 bp Feature: gene Location: 175076-175831 bp Feature: domain Description: his_ut_repres Location: 175154-175826 bp Feature: domain Description: his_ut_repres Location: 1 751 54-1 75826 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: MUSP01000037.1 Burkholderia cenocepacia strain VC14636 VC14636_contig-4000004, whole genome shotgun sequence (61197 bp)
Overview 1 RT 1: 56796-61196 bp Neighborhood of RT #1 [56796, 61197] MFS_MMR_MDR_like AcrR RVT-GII GIIM COG3547 Feature: gene Location: 56796-58316 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56838-58251 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56838-582 51 bp Feature: gene Location: 58462-59100 bp Feature: domain Description: AcrR Location: 58525-59086 bp Feature: domain Description: AcrR Location: 5852 5-59086 bp Feature: gene Location: 59190-60587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59523-60141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5952 3-60141 bp Feature: domain Description: GIIM Note: maturase Location: 60192-60402 bp Feature: domain Description: GIIM Note: maturase Location: 60192 -60402 bp Feature: gene Location: 60752-61197 bp Feature: domain Description: COG3547 Location: 60767-61196 bp Feature: domain Description: COG3547 Location: 60767-61196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), AcrR (COG1309), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: MUSP01000085.1 Burkholderia cenocepacia strain VC14636 VC14636_contig-11000012, whole genome shotgun sequence (123733 bp)
Overview 1 RT 1: 114269-119879 bp Neighborhood of RT #1 [114269, 120001] YeaK PRK06498 RVT-GII GIIM EthD EthD SnoaL_4 Feature: gene Location: 114269-114790 bp Feature: domain Description: YeaK Location: 114290-114746 bp Feature: domain Description: YeaK Location: 114290-114746 bp Feature: gene Location: 115197-116780 bp Feature: domain Description: PRK06498 Location: 115200-116778 bp Feature: domain Description: PRK06498 Location: 115200-116778 bp Feature: gene Location: 117382-118623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117574-118192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117574-118192 bp Feature: domain Description: GIIM Note: maturase Location: 118243-118447 bp Feature: domain Description: GIIM Note: maturase Location: 118243 -118447 bp Feature: gene Location: 118720-119436 bp Feature: domain Description: EthD Location: 118786-118972 bp Feature: domain Description: EthD Location: 118786-118972 bp Feature: domain Description: EthD Location: 119110-119383 bp Feature: domain Description: EthD Location: 119110-1193 83 bp Feature: gene Location: 119489-120001 bp Feature: domain Description: SnoaL_4 Location: 119510-119879 bp Feature: domain Description: SnoaL_4 Location: 119510-119879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeaK (cd04336), PRK06498 (isocitrate lyase; Provisional), RVT-GII, GIIM (pfam08388), EthD (pfam07110), SnoaL_4 (pfam13577)