myRT

myRT report for GCA_001993335.1_ASM199333v1

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Seq: MUSR01000094.1 Burkholderia cenocepacia strain VC15221 VC15221_contig-3000008, whole genome shotgun sequence (163218 bp)
Overview 1 RT 1: 125382-129197 bp Neighborhood of RT #1 [125382, 129202] Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 125382-125711 bp Feature: domain Description: Histone_HNS Location: 125403-125640 bp Feature: domain Description: Histone_HNS Location: 1 25403-1 25640 bp Feature: gene Location: 125858-126064 bp Feature: gene Location: 126037-127386 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 126502-127138 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 26502-1 271 38 bp Feature: gene Location: 127640-128212 bp Feature: domain Description: FIN Location: 127826-128177 bp Feature: domain Description: FIN Location: 1 27826-1 281 77 bp Feature: gene Location: 128447-129202 bp Feature: domain Description: his_ut_repres Location: 128525-129197 bp Feature: domain Description: his_ut_repres Location: 1 28525-1 291 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: MUSR01000155.1 Burkholderia cenocepacia strain VC15221 VC15221_contig-7000013, whole genome shotgun sequence (61767 bp)
Overview 1 RT 1: 56768-61702 bp Neighborhood of RT #1 [56768, 61758] MFS_MMR_MDR_like AcrR RVT-GII GIIM COG3547 Feature: gene Location: 56768-58288 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56810-58223 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56810-582 2 3 bp Feature: gene Location: 58434-59072 bp Feature: domain Description: AcrR Location: 58497-59058 bp Feature: domain Description: AcrR Location: 58497-59058 bp Feature: gene Location: 59162-60559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59495-60113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59495-60113 bp Feature: domain Description: GIIM Note: maturase Location: 60164-60374 bp Feature: domain Description: GIIM Note: maturase Location: 60164-60374 bp Feature: gene Location: 60724-61758 bp Feature: domain Description: COG3547 Location: 60739-61702 bp Feature: domain Description: COG3547 Location: 60739-61702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), AcrR (COG1309), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: MUSR01000191.1 Burkholderia cenocepacia strain VC15221 VC15221_contig-18000015, whole genome shotgun sequence (35049 bp)
Overview 1 RT 1: 3708-9394 bp Neighborhood of RT #1 [3708, 9438] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Feature: gene Location: 3708-4220 bp Feature: domain Description: SnoaL_4 Location: 3729-4098 bp Feature: domain Description: SnoaL_4 Location: 3 729-4098 bp Feature: gene Location: 4273-4989 bp Feature: domain Description: EthD Location: 4339-4525 bp Feature: domain Description: EthD Location: 43 3 9-4525 bp Feature: domain Description: EthD Location: 4663-4936 bp Feature: domain Description: EthD Location: 4663 -493 6 bp Feature: gene Location: 5086-6327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5278-5896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5278-5896 bp Feature: domain Description: GIIM Note: maturase Location: 5947-6151 bp Feature: domain Description: GIIM Note: maturase Location: 5947-6151 bp Feature: gene Location: 6927-8510 bp Feature: domain Description: PRK06498 Location: 6930-8508 bp Feature: domain Description: PRK06498 Location: 693 0-8508 bp Feature: gene Location: 8917-9438 bp Feature: domain Description: YeaK Location: 8938-9394 bp Feature: domain Description: YeaK Location: 893 8-93 94 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336)