myRT

myRT report for GCA_001993435.1_ASM199343v1

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Seq: MUTB01000012.1 Burkholderia cenocepacia strain VC7292 VC7292_contig-1000001, whole genome shotgun sequence (19296 bp)
Overview 1 RT 1: 3720-9405 bp Neighborhood of RT #1 [3720, 9449] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Feature: gene Location: 3720-4232 bp Feature: domain Description: SnoaL_4 Location: 3741-4110 bp Feature: domain Description: SnoaL_4 Location: 3741 -41 1 0 bp Feature: gene Location: 4285-5001 bp Feature: domain Description: EthD Location: 4351-4537 bp Feature: domain Description: EthD Location: 4351 -4537 bp Feature: domain Description: EthD Location: 4675-4948 bp Feature: domain Description: EthD Location: 4675-4948 bp Feature: gene Location: 5098-6339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5290-5908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5290-5908 bp Feature: domain Description: GIIM Note: maturase Location: 5959-6163 bp Feature: domain Description: GIIM Note: maturase Location: 5959-61 63 bp Feature: gene Location: 6938-8521 bp Feature: domain Description: PRK06498 Location: 6941-8519 bp Feature: domain Description: PRK06498 Location: 6941 -851 9 bp Feature: gene Location: 8928-9449 bp Feature: domain Description: YeaK Location: 8949-9405 bp Feature: domain Description: YeaK Location: 8949-9405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336)

Seq: MUTB01000131.1 Burkholderia cenocepacia strain VC7292 VC7292_contig-1000009, whole genome shotgun sequence (263968 bp)
Overview 1 RT 1: 134261-138010 bp Neighborhood of RT #1 [134261, 138081] his_ut_repres FIN RVT-Retrons Histone_HNS Feature: gene Location: 134261-135016 bp Feature: domain Description: his_ut_repres Location: 134339-135011 bp Feature: domain Description: his_ut_repres Location: 134339-135011 bp Feature: gene Location: 135251-135823 bp Feature: domain Description: FIN Location: 135437-135788 bp Feature: domain Description: FIN Location: 135437-135788 bp Feature: gene Location: 136077-137426 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 136542-137178 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 136542 -137178 bp Feature: gene Location: 137399-137605 bp Feature: gene Location: 137752-138081 bp Feature: domain Description: Histone_HNS Location: 137773-138010 bp Feature: domain Description: Histone_HNS Location: 137773-138010 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816)

Seq: MUTB01000053.1 Burkholderia cenocepacia strain VC7292 VC7292_contig-3000004, whole genome shotgun sequence (61780 bp)
Overview 1 RT 1: 56781-61715 bp Neighborhood of RT #1 [56781, 61771] MFS_MMR_MDR_like AcrR RVT-GII GIIM COG3547 Feature: gene Location: 56781-58301 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56823-58236 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56823 -5823 6 bp Feature: gene Location: 58447-59085 bp Feature: domain Description: AcrR Location: 58510-59071 bp Feature: domain Description: AcrR Location: 58510-59071 bp Feature: gene Location: 59175-60572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59508-60126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59508-60126 bp Feature: domain Description: GIIM Note: maturase Location: 60177-60387 bp Feature: domain Description: GIIM Note: maturase Location: 60177-603 87 bp Feature: gene Location: 60737-61771 bp Feature: domain Description: COG3547 Location: 60752-61715 bp Feature: domain Description: COG3 547 Location: 60752-61715 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), AcrR (COG1309), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )