myRT

myRT report for GCA_001993455.1_ASM199345v1

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Seq: MUTD01000014.1 Burkholderia cenocepacia strain VC9855 VC9855_contig-3000001, whole genome shotgun sequence (61800 bp)
Overview 1 RT 1: 56801-61735 bp Neighborhood of RT #1 [56801, 61791] MFS_MMR_MDR_like AcrR RVT-GII GIIM COG3547 Feature: gene Location: 56801-58321 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56843-58256 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56843-58256 bp Feature: gene Location: 58467-59105 bp Feature: domain Description: AcrR Location: 58530-59091 bp Feature: domain Description: AcrR Location: 58530-59091 bp Feature: gene Location: 59195-60592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59528-60146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59528-601 46 bp Feature: domain Description: GIIM Note: maturase Location: 60197-60407 bp Feature: domain Description: GIIM Note: maturase Location: 601 97-60407 bp Feature: gene Location: 60757-61791 bp Feature: domain Description: COG3547 Location: 60772-61735 bp Feature: domain Description: COG3547 Location: 60772-61 735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), AcrR (COG1309), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: MUTD01000054.1 Burkholderia cenocepacia strain VC9855 VC9855_contig-9, whole genome shotgun sequence (274661 bp)
Overview 1 RT 1: 144954-148703 bp Neighborhood of RT #1 [144954, 148774] his_ut_repres FIN RVT-Retrons Histone_HNS Feature: gene Location: 144954-145709 bp Feature: domain Description: his_ut_repres Location: 145032-145704 bp Feature: domain Description: his_ut_repres Location: 145032 -145704 bp Feature: gene Location: 145944-146516 bp Feature: domain Description: FIN Location: 146130-146481 bp Feature: domain Description: FIN Location: 146130-146481 bp Feature: gene Location: 146770-148119 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 147235-147871 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1472 35-147871 bp Feature: gene Location: 148092-148298 bp Feature: gene Location: 148445-148774 bp Feature: domain Description: Histone_HNS Location: 148466-148703 bp Feature: domain Description: Histone_HNS Location: 148466-148703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816)

Seq: MUTD01000090.1 Burkholderia cenocepacia strain VC9855 VC9855_contig-2000015, whole genome shotgun sequence (22903 bp)
Overview 1 RT 1: 3725-9410 bp Neighborhood of RT #1 [3725, 9454] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Feature: gene Location: 3725-4237 bp Feature: domain Description: SnoaL_4 Location: 3746-4115 bp Feature: domain Description: SnoaL_4 Location: 3 746-4115 bp Feature: gene Location: 4290-5006 bp Feature: domain Description: EthD Location: 4356-4542 bp Feature: domain Description: EthD Location: 43 56-4542 bp Feature: domain Description: EthD Location: 4680-4953 bp Feature: domain Description: EthD Location: 4680-4953 bp Feature: gene Location: 5103-6344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5295-5913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5295-5913 bp Feature: domain Description: GIIM Note: maturase Location: 5964-6168 bp Feature: domain Description: GIIM Note: maturase Location: 5964-6168 bp Feature: gene Location: 6943-8526 bp Feature: domain Description: PRK06498 Location: 6946-8524 bp Feature: domain Description: PRK06498 Location: 6946-8524 bp Feature: gene Location: 8933-9454 bp Feature: domain Description: YeaK Location: 8954-9410 bp Feature: domain Description: YeaK Location: 8954-9410 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336)