myRT

myRT report for GCA_001993475.1_ASM199347v1

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Seq: MUTH01000040.1 Burkholderia cenocepacia strain VC13112 VC13112_contig-8000005, whole genome shotgun sequence (263968 bp)
Overview 1 RT 1: 125888-129703 bp Neighborhood of RT #1 [125888, 129708] Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 125888-126217 bp Feature: domain Description: Histone_HNS Location: 125909-126146 bp Feature: domain Description: Histone_HNS Location: 1 25909-1 261 46 bp Feature: gene Location: 126364-126570 bp Feature: gene Location: 126543-127892 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127008-127644 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 27008-1 27644 bp Feature: gene Location: 128146-128718 bp Feature: domain Description: FIN Location: 128332-128683 bp Feature: domain Description: FIN Location: 1 28332-1 28683 bp Feature: gene Location: 128953-129708 bp Feature: domain Description: his_ut_repres Location: 129031-129703 bp Feature: domain Description: his_ut_repres Location: 1 29031 -1 29703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: MUTH01000070.1 Burkholderia cenocepacia strain VC13112 VC13112_contig-4000010, whole genome shotgun sequence (19201 bp)
Overview 1 RT 1: 3730-9415 bp Neighborhood of RT #1 [3730, 9459] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Feature: gene Location: 3730-4242 bp Feature: domain Description: SnoaL_4 Location: 3751-4120 bp Feature: domain Description: SnoaL_4 Location: 3751-412 0 bp Feature: gene Location: 4295-5011 bp Feature: domain Description: EthD Location: 4361-4547 bp Feature: domain Description: EthD Location: 4361-4547 bp Feature: domain Description: EthD Location: 4685-4958 bp Feature: domain Description: EthD Location: 4685-4958 bp Feature: gene Location: 5108-6349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5300-5918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5300-5918 bp Feature: domain Description: GIIM Note: maturase Location: 5969-6173 bp Feature: domain Description: GIIM Note: maturase Location: 5969-6173 bp Feature: gene Location: 6948-8531 bp Feature: domain Description: PRK06498 Location: 6951-8529 bp Feature: domain Description: PRK06498 Location: 6951-852 9 bp Feature: gene Location: 8938-9459 bp Feature: domain Description: YeaK Location: 8959-9415 bp Feature: domain Description: YeaK Location: 8959-9415 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336)

Seq: MUTH01000002.1 Burkholderia cenocepacia strain VC13112 VC13112_contig-1000000, whole genome shotgun sequence (61798 bp)
Overview 1 RT 1: 56799-61733 bp Neighborhood of RT #1 [56799, 61789] MFS_MMR_MDR_like AcrR RVT-GII GIIM COG3547 Feature: gene Location: 56799-58319 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56841-58254 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56841-58254 bp Feature: gene Location: 58465-59103 bp Feature: domain Description: AcrR Location: 58528-59089 bp Feature: domain Description: AcrR Location: 58528-59089 bp Feature: gene Location: 59193-60590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59526-60144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59526-60144 bp Feature: domain Description: GIIM Note: maturase Location: 60195-60405 bp Feature: domain Description: GIIM Note: maturase Location: 60195-60405 bp Feature: gene Location: 60755-61789 bp Feature: domain Description: COG3547 Location: 60770-61733 bp Feature: domain Description: COG3 547 Location: 60770-6173 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), AcrR (COG1309), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )