myRT

myRT report for GCA_001993495.1_ASM199349v1

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Seq: MUTJ01000091.1 Burkholderia cenocepacia strain VC14762 VC14762_contig-2000011, whole genome shotgun sequence (263460 bp)
Overview 1 RT 1: 125888-129703 bp Neighborhood of RT #1 [125888, 129708] Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 125888-126217 bp Feature: domain Description: Histone_HNS Location: 125909-126146 bp Feature: domain Description: Histone_HNS Location: 1 25909-1 261 46 bp Feature: gene Location: 126364-126570 bp Feature: gene Location: 126543-127892 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127008-127644 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 27008-1 27644 bp Feature: gene Location: 128146-128718 bp Feature: domain Description: FIN Location: 128332-128683 bp Feature: domain Description: FIN Location: 1 28332-1 28683 bp Feature: gene Location: 128953-129708 bp Feature: domain Description: his_ut_repres Location: 129031-129703 bp Feature: domain Description: his_ut_repres Location: 1 29031 -1 29703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: MUTJ01000085.1 Burkholderia cenocepacia strain VC14762 VC14762_contig-7000010, whole genome shotgun sequence (61790 bp)
Overview 1 RT 1: 10-4935 bp Neighborhood of RT #1 [10, 5000] COG3547 RVT-GII GIIM AcrR MFS_MMR_MDR_like Feature: gene Location: 10-1044 bp Feature: domain Description: COG3547 Location: 25-988 bp Feature: domain Description: COG3547 Location: 2 5-988 bp Feature: gene Location: 1209-2606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1542-2160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1542 -2 160 bp Feature: domain Description: GIIM Note: maturase Location: 2211-2421 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 11-2 42 1 bp Feature: gene Location: 2696-3334 bp Feature: domain Description: AcrR Location: 2759-3320 bp Feature: domain Description: AcrR Location: 2 759-332 0 bp Feature: gene Location: 3480-5000 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3522-4935 bp Feature: domain Description: MFS_MMR_MDR_like Location: 352 2 -4935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), AcrR (COG1309), MFS_MMR_MDR_like (cd17504)

Seq: MUTJ01000078.1 Burkholderia cenocepacia strain VC14762 VC14762_contig-10, whole genome shotgun sequence (123947 bp)
Overview 1 RT 1: 114494-120101 bp Neighborhood of RT #1 [114494, 120223] YeaK PRK06498 RVT-GII GIIM EthD EthD SnoaL_4 Feature: gene Location: 114494-115015 bp Feature: domain Description: YeaK Location: 114515-114971 bp Feature: domain Description: YeaK Location: 114515-114971 bp Feature: gene Location: 115422-117005 bp Feature: domain Description: PRK06498 Location: 115425-117003 bp Feature: domain Description: PRK06498 Location: 115425-117003 bp Feature: gene Location: 117604-118845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117796-118414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117796-118414 bp Feature: domain Description: GIIM Note: maturase Location: 118465-118669 bp Feature: domain Description: GIIM Note: maturase Location: 118465-118669 bp Feature: gene Location: 118942-119658 bp Feature: domain Description: EthD Location: 119008-119194 bp Feature: domain Description: EthD Location: 119008-119194 bp Feature: domain Description: EthD Location: 119332-119605 bp Feature: domain Description: EthD Location: 1193 3 2-119605 bp Feature: gene Location: 119711-120223 bp Feature: domain Description: SnoaL_4 Location: 119732-120101 bp Feature: domain Description: SnoaL_4 Location: 11973 2-120101 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeaK (cd04336), PRK06498 (isocitrate lyase; Provisional), RVT-GII, GIIM (pfam08388), EthD (pfam07110), SnoaL_4 (pfam13577)