myRT

myRT report for GCA_001993565.1_ASM199356v1

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Seq: MUSL01000011.1 Burkholderia cenocepacia strain VC11482 VC11482_contig-2000001, whole genome shotgun sequence (123772 bp)
Overview 1 RT 1: 3720-9407 bp Neighborhood of RT #1 [3720, 9451] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Feature: gene Location: 3720-4232 bp Feature: domain Description: SnoaL_4 Location: 3741-4110 bp Feature: domain Description: SnoaL_4 Location: 3741 -41 1 0 bp Feature: gene Location: 4285-5001 bp Feature: domain Description: EthD Location: 4351-4537 bp Feature: domain Description: EthD Location: 4351 -4537 bp Feature: domain Description: EthD Location: 4675-4948 bp Feature: domain Description: EthD Location: 4675-4948 bp Feature: gene Location: 5098-6477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5428-6046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5428-6046 bp Feature: domain Description: GIIM Note: maturase Location: 6097-6301 bp Feature: domain Description: GIIM Note: maturase Location: 6097-6301 bp Feature: gene Location: 6940-8523 bp Feature: domain Description: PRK06498 Location: 6943-8521 bp Feature: domain Description: PRK06498 Location: 6943-8521 bp Feature: gene Location: 8930-9451 bp Feature: domain Description: YeaK Location: 8951-9407 bp Feature: domain Description: YeaK Location: 8951 -9407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336)

Seq: MUSL01000032.1 Burkholderia cenocepacia strain VC11482 VC11482_contig-8000003, whole genome shotgun sequence (62073 bp)
Overview 1 RT 1: 298-5223 bp Neighborhood of RT #1 [298, 5288] COG3547 RVT-GII GIIM AcrR MFS_MMR_MDR_like Feature: gene Location: 298-1332 bp Feature: domain Description: COG3547 Location: 313-1276 bp Feature: domain Description: COG3547 Location: 313-12 76 bp Feature: gene Location: 1497-2894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1830-2448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1830-2 448 bp Feature: domain Description: GIIM Note: maturase Location: 2499-2709 bp Feature: domain Description: GIIM Note: maturase Location: 2 499-2 709 bp Feature: gene Location: 2984-3622 bp Feature: domain Description: AcrR Location: 3047-3608 bp Feature: domain Description: AcrR Location: 3047-3608 bp Feature: gene Location: 3768-5288 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3810-5223 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3810-52 2 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), AcrR (COG1309), MFS_MMR_MDR_like (cd17504)

Seq: MUSL01000111.1 Burkholderia cenocepacia strain VC11482 VC11482_contig-1000013, whole genome shotgun sequence (163788 bp)
Overview 1 RT 1: 34090-37839 bp Neighborhood of RT #1 [34090, 37910] his_ut_repres FIN RVT-Retrons Histone_HNS Feature: gene Location: 34090-34845 bp Feature: domain Description: his_ut_repres Location: 34168-34840 bp Feature: domain Description: his_ut_repres Location: 3 4168-3 4840 bp Feature: gene Location: 35080-35652 bp Feature: domain Description: FIN Location: 35266-35617 bp Feature: domain Description: FIN Location: 3 5266-3 5617 bp Feature: gene Location: 35906-37255 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36371-37007 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 63 71-3 7007 bp Feature: gene Location: 37228-37434 bp Feature: gene Location: 37581-37910 bp Feature: domain Description: Histone_HNS Location: 37602-37839 bp Feature: domain Description: Histone_HNS Location: 3 7602-3 783 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816)