myRT

myRT report for GCA_001993595.1_ASM199359v1

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Seq: MUUA01000006.1 Burkholderia cenocepacia strain VC8156 VC8156_contig-5000000, whole genome shotgun sequence (52704 bp)
Overview 1 RT 1: 48811-52696 bp Neighborhood of RT #1 [48811, 52696] Gmd GDP_MD_SDR_e RVT-GII GIIM Feature: gene Location: 48811-49857 bp Feature: domain Description: Gmd Location: 48826-49843 bp Feature: domain Description: Gmd Location: 48826-49843 bp Feature: gene Location: 49844-50809 bp Feature: domain Description: GDP_MD_SDR_e Location: 49880-50774 bp Feature: domain Description: GDP_MD_SDR_e Location: 49880-50774 bp Feature: gene Location: 50929-52296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51262-51877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 262-51 877 bp Feature: domain Description: GIIM Note: maturase Location: 51937-52138 bp Feature: domain Description: GIIM Note: maturase Location: 51 937-521 38 bp Feature: gene Location: 52367-52696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Gmd (COG1089), GDP_MD_SDR_e (cd05260), RVT-GII, GIIM (pfam08388)

Seq: MUUA01000084.1 Burkholderia cenocepacia strain VC8156 VC8156_contig-1000012, whole genome shotgun sequence (45630 bp)
Overview 1 RT 1: 43236-45526 bp Neighborhood of RT #1 [43236, 45630] RlpA RVT-GII GIIM Feature: gene Location: 43236-43847 bp Feature: domain Description: RlpA Location: 43305-43812 bp Feature: domain Description: RlpA Location: 43305-43812 bp Feature: gene Location: 43917-44246 bp Feature: gene Location: 44317-45630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44650-45265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44650-452 65 bp Feature: domain Description: GIIM Note: maturase Location: 45325-45526 bp Feature: domain Description: GIIM Note: maturase Location: 4532 5-4552 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RlpA (COG0797), RVT-GII, GIIM (pfam08388)

Seq: MUUA01000002.1 Burkholderia cenocepacia strain VC8156 VC8156_contig-1000000, whole genome shotgun sequence (101503 bp)
Overview 1 RT 1: 1-2968 bp Neighborhood of RT #1 [1, 2973] RVT-GII GIIM PRK08133 Feature: gene Location: 1-1314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 4-949 bp Feature: domain Description: GIIM Note: maturase Location: 1009-1210 bp Feature: domain Description: GIIM Note: maturase Location: 1009-1210 bp Feature: gene Location: 1385-1714 bp Feature: gene Location: 1783-2973 bp Feature: domain Description: PRK08133 Location: 1789-2968 bp Feature: domain Description: PRK0813 3 Location: 1789-2968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK08133 (O-succinylhomoserine sulfhydrylase; Validated)

Seq: MUUA01000062.1 Burkholderia cenocepacia strain VC8156 VC8156_contig-10, whole genome shotgun sequence (59489 bp)
Overview 1 RT 1: 53241-59489 bp Neighborhood of RT #1 [53241, 59489] MFS_SV2_like MscK RVT-GII GIIM Feature: gene Location: 53241-54659 bp Feature: domain Description: MFS_SV2_like Location: 53361-54609 bp Feature: domain Description: MFS_SV2_like Location: 53361-54 609 bp Feature: gene Location: 55116-57578 bp Feature: domain Description: MscK Location: 55212-57534 bp Feature: domain Description: MscK Location: 55212-57534 bp Feature: gene Location: 57722-59089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58055-58670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58055-58670 bp Feature: domain Description: GIIM Note: maturase Location: 58730-58931 bp Feature: domain Description: GIIM Note: maturase Location: 58730-58931 bp Feature: gene Location: 59160-59489 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_SV2_like (cd17316), MscK (COG3264), RVT-GII, GIIM (pfam08388)

Seq: MUUA01000035.1 Burkholderia cenocepacia strain VC8156 VC8156_contig-5, whole genome shotgun sequence (266463 bp)
Overview 1 RT 1: 133797-139073 bp Neighborhood of RT #1 [133797, 139078] MFS_MucK Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 133797-135044 bp Feature: domain Description: MFS_MucK Location: 133887-135021 bp Feature: domain Description: MFS_MucK Location: 133887-135 021 bp Feature: gene Location: 135278-135607 bp Feature: domain Description: Histone_HNS Location: 135299-135536 bp Feature: domain Description: Histone_HNS Location: 135 299-135 5 36 bp Feature: gene Location: 135926-137275 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 136391-137027 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 136391-137027 bp Feature: gene Location: 137528-138100 bp Feature: domain Description: FIN Location: 137708-138065 bp Feature: domain Description: FIN Location: 137708-138065 bp Feature: gene Location: 138323-139078 bp Feature: domain Description: his_ut_repres Location: 138401-139073 bp Feature: domain Description: his_ut_repres Location: 138401-139073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: MUUA01000016.1 Burkholderia cenocepacia strain VC8156 VC8156_contig-4000001, whole genome shotgun sequence (3969 bp)
Overview 1 RT 1: 1-3267 bp Neighborhood of RT #1 [1, 3308] RVT-GII GIIM ALDH_F7_AASADH Feature: gene Location: 1-1314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-949 bp Feature: domain Description: GIIM Note: maturase Location: 1009-1210 bp Feature: domain Description: GIIM Note: maturase Location: 1009-1210 bp Feature: gene Location: 1385-1714 bp Feature: gene Location: 1797-3308 bp Feature: domain Description: ALDH_F7_AASADH Location: 1851-3267 bp Feature: domain Description: ALDH_F7_AASADH Location: 1851-326 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), ALDH_F7_AASADH (cd07130)