myRT

myRT report for GCA_001993615.1_ASM199361v1

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Seq: MUUF01000065.1 Burkholderia cenocepacia strain VC13476 VC13476_contig-1000010, whole genome shotgun sequence (59549 bp)
Overview 1 RT 1: 53301-59549 bp Neighborhood of RT #1 [53301, 59549] MFS_SV2_like MscK RVT-GII GIIM Feature: gene Location: 53301-54719 bp Feature: domain Description: MFS_SV2_like Location: 53421-54669 bp Feature: domain Description: MFS_SV2_like Location: 53421 -54669 bp Feature: gene Location: 55176-57638 bp Feature: domain Description: MscK Location: 55272-57594 bp Feature: domain Description: MscK Location: 55272-57594 bp Feature: gene Location: 57782-59149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58115-58730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 581 1 5-58730 bp Feature: domain Description: GIIM Note: maturase Location: 58790-58991 bp Feature: domain Description: GIIM Note: maturase Location: 58790-58991 bp Feature: gene Location: 59220-59549 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_SV2_like (cd17316), MscK (COG3264), RVT-GII, GIIM (pfam08388)

Seq: MUUF01000023.1 Burkholderia cenocepacia strain VC13476 VC13476_contig-3000003, whole genome shotgun sequence (278 bp)
Overview 1 RT 1: 1-271 bp Neighborhood of RT #1 [1, 278] RVT-GII Feature: gene Location: 1-278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-2 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MUUF01000094.1 Burkholderia cenocepacia strain VC13476 VC13476_contig-3000014, whole genome shotgun sequence (38847 bp)
Overview 1 RT 1: 1-3230 bp Neighborhood of RT #1 [1, 3238] RVT-GII GIIM RsmI PRK14673 Feature: gene Location: 1-330 bp Feature: gene Location: 401-1768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 734-1349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 4-13 49 bp Feature: domain Description: GIIM Note: maturase Location: 1409-1610 bp Feature: domain Description: GIIM Note: maturase Location: 1409-1610 bp Feature: gene Location: 1876-2763 bp Feature: domain Description: RsmI Location: 1924-2737 bp Feature: domain Description: RsmI Location: 1924-273 7 bp Feature: gene Location: 2762-3238 bp Feature: domain Description: PRK14673 Location: 2813-3230 bp Feature: domain Description: PRK14673 Location: 2813 -3 23 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RsmI (COG0313), PRK14673 (hypothetical protein; Provisional), RVT-GII, GIIM (pfam08388)

Seq: MUUF01000062.1 Burkholderia cenocepacia strain VC13476 VC13476_contig-8000009, whole genome shotgun sequence (355907 bp)
Overview 1 RT 1: 127634-132892 bp Neighborhood of RT #1 [127634, 132915] his_ut_repres FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 127634-128389 bp Feature: domain Description: his_ut_repres Location: 127712-128384 bp Feature: domain Description: his_ut_repres Location: 127712-128384 bp Feature: gene Location: 128612-129184 bp Feature: domain Description: FIN Location: 128792-129149 bp Feature: domain Description: FIN Location: 128792-12914 9 bp Feature: gene Location: 129437-130786 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 129902-130538 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 129902-130538 bp Feature: gene Location: 131105-131434 bp Feature: domain Description: Histone_HNS Location: 131126-131363 bp Feature: domain Description: Histone_HNS Location: 131126-131363 bp Feature: gene Location: 131668-132915 bp Feature: domain Description: MFS_MucK Location: 131758-132892 bp Feature: domain Description: MFS_MucK Location: 131758-132892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)

Seq: MUUF01000052.1 Burkholderia cenocepacia strain VC13476 VC13476_contig-1000008, whole genome shotgun sequence (52696 bp)
Overview 1 RT 1: 1-3872 bp Neighborhood of RT #1 [1, 3886] RVT-GII GIIM GDP_MD_SDR_e Gmd Feature: gene Location: 1-330 bp Feature: gene Location: 401-1768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 734-1349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 734-1349 bp Feature: domain Description: GIIM Note: maturase Location: 1409-1610 bp Feature: domain Description: GIIM Note: maturase Location: 1409-1610 bp Feature: gene Location: 1888-2853 bp Feature: domain Description: GDP_MD_SDR_e Location: 1924-2818 bp Feature: domain Description: GDP_MD_SDR_e Location: 1924-2818 bp Feature: gene Location: 2840-3886 bp Feature: domain Description: Gmd Location: 2855-3872 bp Feature: domain Description: Gmd Location: 285 5 -3872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GDP_MD_SDR_e (cd05260), Gmd (COG1089), RVT-GII, GIIM (pfam08388)