myRT

myRT report for GCA_001993635.1_ASM199363v1

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Seq: MUSO01000056.1 Burkholderia cenocepacia strain VC14165 VC14165_contig-1000008, whole genome shotgun sequence (163803 bp)
Overview 1 RT 1: 125902-129717 bp Neighborhood of RT #1 [125902, 129722] Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 125902-126231 bp Feature: domain Description: Histone_HNS Location: 125923-126160 bp Feature: domain Description: Histone_HNS Location: 1 25923-1 261 60 bp Feature: gene Location: 126378-126584 bp Feature: gene Location: 126557-127906 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127022-127658 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 27022-1 27658 bp Feature: gene Location: 128160-128732 bp Feature: domain Description: FIN Location: 128346-128697 bp Feature: domain Description: FIN Location: 1 28346-1 28697 bp Feature: gene Location: 128967-129722 bp Feature: domain Description: his_ut_repres Location: 129045-129717 bp Feature: domain Description: his_ut_repres Location: 1 29045-1 2971 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: MUSO01000075.1 Burkholderia cenocepacia strain VC14165 VC14165_contig-7000010, whole genome shotgun sequence (61705 bp)
Overview 1 RT 1: 1-4844 bp Neighborhood of RT #1 [1, 4909] COG3547 RVT-GII GIIM AcrR MFS_MMR_MDR_like Feature: gene Location: 1-953 bp Feature: domain Description: COG3547 Location: 16-949 bp Feature: domain Description: COG3547 Location: 16-949 bp Feature: gene Location: 1118-2515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1451-2069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1451-2 069 bp Feature: domain Description: GIIM Note: maturase Location: 2120-2330 bp Feature: domain Description: GIIM Note: maturase Location: 2 12 0-2 330 bp Feature: gene Location: 2605-3243 bp Feature: domain Description: AcrR Location: 2668-3229 bp Feature: domain Description: AcrR Location: 2 668-32 2 9 bp Feature: gene Location: 3389-4909 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3431-4844 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3431-4844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), AcrR (COG1309), MFS_MMR_MDR_like (cd17504)

Seq: MUSO01000062.1 Burkholderia cenocepacia strain VC14165 VC14165_contig-1000009, whole genome shotgun sequence (89161 bp)
Overview 1 RT 1: 79707-85315 bp Neighborhood of RT #1 [79707, 85437] YeaK PRK06498 RVT-GII GIIM EthD EthD SnoaL_4 Feature: gene Location: 79707-80228 bp Feature: domain Description: YeaK Location: 79728-80184 bp Feature: domain Description: YeaK Location: 79728-80184 bp Feature: gene Location: 80635-82218 bp Feature: domain Description: PRK06498 Location: 80638-82216 bp Feature: domain Description: PRK06498 Location: 8063 8-82216 bp Feature: gene Location: 82818-84059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83010-83628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83 010-83 628 bp Feature: domain Description: GIIM Note: maturase Location: 83679-83883 bp Feature: domain Description: GIIM Note: maturase Location: 83 679-83 883 bp Feature: gene Location: 84156-84872 bp Feature: domain Description: EthD Location: 84222-84408 bp Feature: domain Description: EthD Location: 84222-84408 bp Feature: domain Description: EthD Location: 84546-84819 bp Feature: domain Description: EthD Location: 84546-84819 bp Feature: gene Location: 84925-85437 bp Feature: domain Description: SnoaL_4 Location: 84946-85315 bp Feature: domain Description: SnoaL_4 Location: 84946-853 15 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeaK (cd04336), PRK06498 (isocitrate lyase; Provisional), RVT-GII, GIIM (pfam08388), EthD (pfam07110), SnoaL_4 (pfam13577)