myRT

myRT report for GCA_001994605.1_ASM199460v1

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Seq: MUQN01000215.1 Burkholderia cenocepacia strain VC5731 VC5731_contig-3000015, whole genome shotgun sequence (61777 bp)
Overview 1 RT 1: 56778-61712 bp Neighborhood of RT #1 [56778, 61768] MFS_MMR_MDR_like AcrR RVT-GII GIIM COG3547 Feature: gene Location: 56778-58298 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56820-58233 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56820-58233 bp Feature: gene Location: 58444-59082 bp Feature: domain Description: AcrR Location: 58507-59068 bp Feature: domain Description: AcrR Location: 58507-59068 bp Feature: gene Location: 59172-60569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59505-60123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59505-601 23 bp Feature: domain Description: GIIM Note: maturase Location: 60174-60384 bp Feature: domain Description: GIIM Note: maturase Location: 601 74-60384 bp Feature: gene Location: 60734-61768 bp Feature: domain Description: COG3547 Location: 60749-61712 bp Feature: domain Description: COG3547 Location: 60749-61 71 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), AcrR (COG1309), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: MUQN01000045.1 Burkholderia cenocepacia strain VC5731 VC5731_contig-13000002, whole genome shotgun sequence (263348 bp)
Overview 1 RT 1: 92549-96364 bp Neighborhood of RT #1 [92549, 96369] Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 92549-92878 bp Feature: domain Description: Histone_HNS Location: 92570-92807 bp Feature: domain Description: Histone_HNS Location: 92 570-92 807 bp Feature: gene Location: 93025-93231 bp Feature: gene Location: 93204-94553 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 93669-94305 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 93669-94305 bp Feature: gene Location: 94807-95379 bp Feature: domain Description: FIN Location: 94993-95344 bp Feature: domain Description: FIN Location: 94993-95344 bp Feature: gene Location: 95614-96369 bp Feature: domain Description: his_ut_repres Location: 95692-96364 bp Feature: domain Description: his_ut_repres Location: 95692 -96364 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: MUQN01000059.1 Burkholderia cenocepacia strain VC5731 VC5731_contig-3000004, whole genome shotgun sequence (13446 bp)
Overview 1 RT 1: 4008-9615 bp Neighborhood of RT #1 [4008, 9737] YeaK PRK06498 RVT-GII GIIM EthD EthD SnoaL_4 Feature: gene Location: 4008-4529 bp Feature: domain Description: YeaK Location: 4029-4485 bp Feature: domain Description: YeaK Location: 4029-4485 bp Feature: gene Location: 4936-6519 bp Feature: domain Description: PRK06498 Location: 4939-6517 bp Feature: domain Description: PRK06498 Location: 493 9-6517 bp Feature: gene Location: 7118-8359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7310-7928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 10-7928 bp Feature: domain Description: GIIM Note: maturase Location: 7979-8183 bp Feature: domain Description: GIIM Note: maturase Location: 7979-8183 bp Feature: gene Location: 8456-9172 bp Feature: domain Description: EthD Location: 8522-8708 bp Feature: domain Description: EthD Location: 8522-8708 bp Feature: domain Description: EthD Location: 8846-9119 bp Feature: domain Description: EthD Location: 8846-9119 bp Feature: gene Location: 9225-9737 bp Feature: domain Description: SnoaL_4 Location: 9246-9615 bp Feature: domain Description: SnoaL_4 Location: 9246-9615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeaK (cd04336), PRK06498 (isocitrate lyase; Provisional), RVT-GII, GIIM (pfam08388), EthD (pfam07110), SnoaL_4 (pfam13577)

Seq: MUQN01000107.1 Burkholderia cenocepacia strain VC5731 VC5731_contig-12000007, whole genome shotgun sequence (263315 bp)
Overview 1 RT 1: 166947-170696 bp Neighborhood of RT #1 [166947, 170767] his_ut_repres FIN RVT-Retrons Histone_HNS Feature: gene Location: 166947-167702 bp Feature: domain Description: his_ut_repres Location: 167025-167697 bp Feature: domain Description: his_ut_repres Location: 167025-167697 bp Feature: gene Location: 167937-168509 bp Feature: domain Description: FIN Location: 168123-168474 bp Feature: domain Description: FIN Location: 168123-1684 74 bp Feature: gene Location: 168763-170112 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 169228-169864 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 169228-169864 bp Feature: gene Location: 170085-170291 bp Feature: gene Location: 170438-170767 bp Feature: domain Description: Histone_HNS Location: 170459-170696 bp Feature: domain Description: Histone_HNS Location: 1704 59-170696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816)