myRT

myRT report for GCA_001994655.1_ASM199465v1

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Seq: MURK01000091.1 Burkholderia cenocepacia strain VC12599 VC12599_contig-6000008, whole genome shotgun sequence (263923 bp)
Overview 1 RT 1: 125879-129694 bp Neighborhood of RT #1 [125879, 129699] Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 125879-126208 bp Feature: domain Description: Histone_HNS Location: 125900-126137 bp Feature: domain Description: Histone_HNS Location: 1 25900-1 261 37 bp Feature: gene Location: 126355-126561 bp Feature: gene Location: 126534-127883 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 126999-127635 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 26999-1 27635 bp Feature: gene Location: 128137-128709 bp Feature: domain Description: FIN Location: 128323-128674 bp Feature: domain Description: FIN Location: 1 28323-1 28674 bp Feature: gene Location: 128944-129699 bp Feature: domain Description: his_ut_repres Location: 129022-129694 bp Feature: domain Description: his_ut_repres Location: 1 29022-1 29694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: MURK01000078.1 Burkholderia cenocepacia strain VC12599 VC12599_contig-2000007, whole genome shotgun sequence (124051 bp)
Overview 1 RT 1: 114438-120045 bp Neighborhood of RT #1 [114438, 120167] YeaK PRK06498 RVT-GII GIIM EthD EthD SnoaL_4 Feature: gene Location: 114438-114959 bp Feature: domain Description: YeaK Location: 114459-114915 bp Feature: domain Description: YeaK Location: 114459-114915 bp Feature: gene Location: 115366-116949 bp Feature: domain Description: PRK06498 Location: 115369-116947 bp Feature: domain Description: PRK06498 Location: 115369-116947 bp Feature: gene Location: 117548-118789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117740-118358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117740-118358 bp Feature: domain Description: GIIM Note: maturase Location: 118409-118613 bp Feature: domain Description: GIIM Note: maturase Location: 118409-118613 bp Feature: gene Location: 118886-119602 bp Feature: domain Description: EthD Location: 118952-119138 bp Feature: domain Description: EthD Location: 118952 -119138 bp Feature: domain Description: EthD Location: 119276-119549 bp Feature: domain Description: EthD Location: 1192 76-119549 bp Feature: gene Location: 119655-120167 bp Feature: domain Description: SnoaL_4 Location: 119676-120045 bp Feature: domain Description: SnoaL_4 Location: 119676-12 0045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeaK (cd04336), PRK06498 (isocitrate lyase; Provisional), RVT-GII, GIIM (pfam08388), EthD (pfam07110), SnoaL_4 (pfam13577)

Seq: MURK01000173.1 Burkholderia cenocepacia strain VC12599 VC12599_contig-4000015, whole genome shotgun sequence (61791 bp)
Overview 1 RT 1: 10-4935 bp Neighborhood of RT #1 [10, 5000] COG3547 RVT-GII GIIM AcrR MFS_MMR_MDR_like Feature: gene Location: 10-1044 bp Feature: domain Description: COG3547 Location: 25-988 bp Feature: domain Description: COG3 547 Location: 25-988 bp Feature: gene Location: 1209-2606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1542-2160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1542-2160 bp Feature: domain Description: GIIM Note: maturase Location: 2211-2421 bp Feature: domain Description: GIIM Note: maturase Location: 2211-2421 bp Feature: gene Location: 2696-3334 bp Feature: domain Description: AcrR Location: 2759-3320 bp Feature: domain Description: AcrR Location: 2759-3 3 20 bp Feature: gene Location: 3480-5000 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3522-4935 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3 522-493 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), AcrR (COG1309), MFS_MMR_MDR_like (cd17504)