myRT

myRT report for GCA_001994855.1_ASM199485v1

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Seq: MURC01000085.1 Burkholderia cenocepacia strain VC5300 VC5300_contig-2000007, whole genome shotgun sequence (236084 bp)
Overview 1 RT 1: 98040-101855 bp Neighborhood of RT #1 [98040, 101860] Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 98040-98369 bp Feature: domain Description: Histone_HNS Location: 98061-98298 bp Feature: domain Description: Histone_HNS Location: 98061 -98298 bp Feature: gene Location: 98516-98722 bp Feature: gene Location: 98695-100044 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 99160-99796 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 991 60-99796 bp Feature: gene Location: 100298-100870 bp Feature: domain Description: FIN Location: 100484-100835 bp Feature: domain Description: FIN Location: 1 00484-1 00835 bp Feature: gene Location: 101105-101860 bp Feature: domain Description: his_ut_repres Location: 101183-101855 bp Feature: domain Description: his_ut_repres Location: 1 01 1 83-1 01 855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FIN (cd16389), his_ut_repres (TIGR02018), Histone_HNS (pfam00816), RVT-Retrons

Seq: MURC01000017.1 Burkholderia cenocepacia strain VC5300 VC5300_contig-4000001, whole genome shotgun sequence (61756 bp)
Overview 1 RT 1: 56757-61691 bp Neighborhood of RT #1 [56757, 61747] MFS_MMR_MDR_like AcrR RVT-GII GIIM COG3547 Feature: gene Location: 56757-58277 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56799-58212 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56799-582 12 bp Feature: gene Location: 58423-59061 bp Feature: domain Description: AcrR Location: 58486-59047 bp Feature: domain Description: AcrR Location: 58486-59047 bp Feature: gene Location: 59151-60548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59484-60102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59484-60102 bp Feature: domain Description: GIIM Note: maturase Location: 60153-60363 bp Feature: domain Description: GIIM Note: maturase Location: 60153-60363 bp Feature: gene Location: 60713-61747 bp Feature: domain Description: COG3547 Location: 60728-61691 bp Feature: domain Description: COG3547 Location: 6072 8-61691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), AcrR (COG1309), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: MURC01000014.1 Burkholderia cenocepacia strain VC5300 VC5300_contig-1000001, whole genome shotgun sequence (19425 bp)
Overview 1 RT 1: 3720-9405 bp Neighborhood of RT #1 [3720, 9449] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Feature: gene Location: 3720-4232 bp Feature: domain Description: SnoaL_4 Location: 3741-4110 bp Feature: domain Description: SnoaL_4 Location: 3 741-4110 bp Feature: gene Location: 4285-5001 bp Feature: domain Description: EthD Location: 4351-4537 bp Feature: domain Description: EthD Location: 43 51-453 7 bp Feature: domain Description: EthD Location: 4675-4948 bp Feature: domain Description: EthD Location: 4675-4948 bp Feature: gene Location: 5098-6339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5290-5908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5290-5908 bp Feature: domain Description: GIIM Note: maturase Location: 5959-6163 bp Feature: domain Description: GIIM Note: maturase Location: 5959-6163 bp Feature: gene Location: 6938-8521 bp Feature: domain Description: PRK06498 Location: 6941-8519 bp Feature: domain Description: PRK06498 Location: 6941-8519 bp Feature: gene Location: 8928-9449 bp Feature: domain Description: YeaK Location: 8949-9405 bp Feature: domain Description: YeaK Location: 8949-9405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336)