myRT

myRT report for GCA_001997225.1_ASM199722v1

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Seq: CP011464.1 Vibrio anguillarum strain PF7 chromosome I sequence (3123307 bp)
Overview 1 RT 1: 3046904-3054283 bp 2 RT 2: 3099849-3104283 bp Neighborhood of RT #1 [3046904, 3054283] ABC_ATPase COG3547 RVT_N RVT-GII GIIM Neighborhood of RT #2 [3099849, 3104405] RimL PBP2_HisK RVT-UG28 COG3440 Feature: gene Location: 3046904-3049462 bp Ori: AQP37147.1 Feature: domain Description: ABC_ATPase Location: 3047183-3048977 bp Feature: domain Description: ABC_ATPase Location: 30471 83-3048977 bp Feature: gene Location: 3049839-3050873 bp Ori: AQP37291.1 Feature: domain Description: COG3547 Location: 3049857-3050820 bp Feature: domain Description: COG3547 Location: 3049857-3050820 bp Feature: gene Location: 3051170-3052642 bp Feature: domain Description: RVT_N Location: 3051218-3051461 bp Feature: domain Description: RVT_N Location: 3051 21 8-3051 461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3051506-3052133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3051 506-30521 33 bp Feature: domain Description: GIIM Note: maturase Location: 3052190-3052418 bp Feature: domain Description: GIIM Note: maturase Location: 30521 90-305241 8 bp Feature: gene Location: 3053293-3053481 bp Feature: gene Location: 3053690-3054283 bp Feature: gene Location: 3099849-3100340 bp Ori: AQP37294.1 Feature: domain Description: RimL Location: 3099864-3100323 bp Feature: domain Description: RimL Location: 3099864-31 00323 bp Feature: gene Location: 3100519-3101265 bp Ori: AQP37295.1 Feature: domain Description: PBP2_HisK Location: 3100594-3101245 bp Feature: domain Description: PBP2_HisK Location: 31 00594-31 01 245 bp Feature: gene Location: 3101446-3102945 bp Ori: AQP37185.1 Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 3101734-3102370 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 31 01 734-31 02370 bp Feature: gene Location: 3103202-3103429 bp Feature: gene Location: 3103704-3104405 bp Ori: AQP37187.1 Feature: domain Description: COG3440 Location: 3104073-3104283 bp Feature: domain Description: COG3440 Location: 31 04073-31 04283 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_ATPase (pfam09818), COG3547 (Transposase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), RimL (COG1670), PBP2_HisK (cd13704), RVT-UG28, COG3440 (Predicted restriction endonuclease )

Seq: CP011465.1 Vibrio anguillarum strain PF7 chromosome II sequence (1058697 bp)
Overview 1 RT 1: 836813-843806 bp 2 RT 2: 1038403-1045180 bp Neighborhood of RT #1 [836813, 843806] HTH_LUXR AAA_21 AAA_21 RVT_N RVT-GII GIIM PRK01889 Neighborhood of RT #2 [1038403, 1045191] ADC COG3268 RVT_N RVT-GII GIIM INT_RitA_C_like PRK10473 Feature: gene Location: 836813-837613 bp Ori: AQP37960.1 Feature: domain Description: HTH_LUXR Location: 837422-837584 bp Feature: domain Description: HTH_LUXR Location: 83742 2 -837584 bp Feature: gene Location: 837944-839731 bp Ori: AQP38162.1 Feature: domain Description: AAA_21 Location: 838025-838079 bp Feature: domain Description: AAA_2 1 Location: 83802 5-838079 bp Feature: domain Description: AAA_21 Location: 838691-839000 bp Feature: domain Description: AAA_2 1 Location: 838691-839000 bp Feature: gene Location: 840513-841985 bp Ori: AQP37961.1 Feature: domain Description: RVT_N Location: 840561-840801 bp Feature: domain Description: RVT_N Location: 840561-840801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 840849-841476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 840849-841476 bp Feature: domain Description: GIIM Note: maturase Location: 841533-841761 bp Feature: domain Description: GIIM Note: maturase Location: 841533-841761 bp Feature: gene Location: 842508-843545 bp Ori: AQP37962.1 Feature: domain Description: PRK01889 Location: 842517-843528 bp Feature: domain Description: PRK01889 Location: 842 517-84352 8 bp Feature: gene Location: 843555-843806 bp Feature: gene Location: 1038403-1039335 bp Ori: AQP38173.1 Feature: domain Description: ADC Location: 1038604-1039030 bp Feature: domain Description: ADC Location: 1038604-1039030 bp Feature: gene Location: 1039650-1040732 bp Ori: AQP38124.1 Feature: domain Description: COG3268 Location: 1039680-1040712 bp Feature: domain Description: COG32 68 Location: 1039680-1040712 bp Feature: gene Location: 1041256-1042887 bp Ori: AQP38125.1 Feature: domain Description: RVT_N Location: 1041463-1041706 bp Feature: domain Description: RVT_N Location: 1041463-1041706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1041751-1042378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1041751-1042 378 bp Feature: domain Description: GIIM Note: maturase Location: 1042438-1042663 bp Feature: domain Description: GIIM Note: maturase Location: 1042 438-1042 663 bp Feature: gene Location: 1043036-1043632 bp Ori: AQP38126.1 Feature: domain Description: INT_RitA_C_like Location: 1043081-1043615 bp Feature: domain Description: INT_RitA_C_like Location: 1043081-1043615 bp Feature: gene Location: 1043983-1045191 bp Ori: AQP38127.1 Feature: domain Description: PRK10473 Location: 1044007-1045180 bp Feature: domain Description: PRK10473 Location: 1044007-1045180 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_LUXR (smart00421), AAA_21 (pfam13304), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK01889 (GTPase RsgA; Reviewed), ADC (pfam06314), COG3268 (Uncharacterized conserved protein, related to short-chain dehydrogenases ), INT_RitA_C_like (cd01188), PRK10473 (MdtL family multidrug efflux MFS transporter)