myRT

myRT report for GCA_001998785.1_ASM199878v1

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Seq: MQUE01000015.1 Vibrio parahaemolyticus strain ATCC 17802 ATCC_17802contig_15, whole genome shotgun sequence (215065 bp)
Overview 1 RT 1: 120-18665 bp Neighborhood of RT #1 [120, 18665] HsdR RVT-UG1 DUF2384 RVT-Retrons AAA_21 Feature: gene Location: 120-3068 bp Feature: domain Description: HsdR Location: 156-2985 bp Feature: domain Description: HsdR Location: 1 56-2985 bp Feature: gene Location: 3138-7007 bp Ori: OOE29054.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 3825-4353 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 3825-4353 bp Feature: gene Location: 7461-9368 bp Feature: gene Location: 9646-9885 bp Ori: OOE29056.1 Feature: domain Description: DUF2384 Location: 9733-9874 bp Feature: domain Description: DUF2384 Location: 9733-9874 bp Feature: gene Location: 10623-11803 bp Feature: gene Location: 11860-13569 bp Feature: gene Location: 13625-14674 bp Ori: OOE29058.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13760-14300 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 3760-1 4300 bp Feature: gene Location: 14861-16969 bp Ori: OOE29059.1 Feature: domain Description: AAA_21 Location: 14936-15884 bp Feature: domain Description: AAA_21 Location: 1 4936-1 5884 bp Feature: gene Location: 17082-18665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdR (COG4096), RVT-UG1, DUF2384 (pfam09722), RVT-Retrons, AAA_21 (pfam13304)