myRT

myRT report for GCA_001998845.1_ASM199884v1

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Seq: CP011436.1 Vibrio anguillarum strain VIB 18 chromosome I sequence (3060756 bp)
Overview 1 RT 1: 1708167-1713759 bp Neighborhood of RT #1 [1708167, 1713759] Ser_Recombinase Recombinase Zn_ribbon_recom RVT-Retrons Feature: gene Location: 1708167-1710032 bp Feature: domain Description: Ser_Recombinase Location: 1708206-1708647 bp Feature: domain Description: Ser_Recombinase Location: 1 708206-1 708647 bp Feature: domain Description: Recombinase Location: 1708800-1709070 bp Feature: domain Description: Recombinase Location: 1 708800-1 709070 bp Feature: domain Description: Zn_ribbon_recom Location: 1709193-1709367 bp Feature: domain Description: Zn_ribbon_recom Location: 1 7091 93-1 709367 bp Feature: gene Location: 1710499-1711707 bp Feature: gene Location: 1711855-1712994 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1712095-1712722 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 71 2095-1 71 2722 bp Feature: gene Location: 1713075-1713374 bp Feature: gene Location: 1713364-1713759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ser_Recombinase (cl02788), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-Retrons

Seq: CP011437.1 Vibrio anguillarum strain VIB 18 chromosome II sequence (1123063 bp)
Overview 1 RT 1: 86787-94096 bp Neighborhood of RT #1 [86787, 94260] DUF2235 RVT_N RVT-GII SMC_prok_B Feature: gene Location: 86787-89498 bp Feature: domain Description: DUF2235 Location: 88065-88896 bp Feature: domain Description: DUF2 2 35 Location: 88065-88896 bp Feature: gene Location: 90202-90387 bp Feature: gene Location: 90366-91837 bp Feature: RT Description: RVT_N Location: 90414-90654 bp Feature: RT Description: RVT_N Location: 90414-90654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90702-91209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90702 -912 09 bp Feature: gene Location: 91946-92218 bp Feature: gene Location: 92767-94260 bp Feature: domain Description: SMC_prok_B Location: 93337-94096 bp Feature: domain Description: SMC_prok_B Location: 93337-94096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2235 (pfam09994), RVT_N (pfam13655), RVT-GII, SMC_prok_B (TIGR02168)