myRT

myRT report for GCA_002001165.1_ASM200116v1

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Seq: MUNQ01000006.1 Rhodanobacter sp. C05 NODE_3_length_459248_cov_11.6405_ID_5, whole genome shotgun sequence (459248 bp)
Overview 1 RT 1: 399318-406210 bp Neighborhood of RT #1 [399318, 406401] STKc_PknB_like SRAP group_II_RT_mat RVT-UG13 RMtype1_S_SonII-TRD2-CR2_like RMtype1_S_SonII-TRD2-CR2_like HsdM Feature: gene Location: 399318-400961 bp Ori: OOG42688.1 Feature: domain Description: STKc_PknB_like Location: 399360-400146 bp Feature: domain Description: STKc_PknB_like Location: 399360-4001 46 bp Feature: gene Location: 401208-402191 bp Ori: OOG42689.1 Feature: domain Description: SRAP Location: 401622-402141 bp Feature: domain Description: SRAP Location: 401 622-4021 41 bp Feature: gene Location: 402294-403667 bp Ori: OOG42690.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 402381-402603 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 402381 -402603 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 402705-403176 bp Feature: RT Description: RVT-UG1 3 Note: UG1 3 RT Location: 402705-4031 76 bp Feature: gene Location: 403664-404962 bp Ori: OOG42691.1 Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 403856-404198 bp Feature: domain Description: RMtype1 _S_SonII-TRD2-CR2_like Location: 403856-4041 98 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 404384-404939 bp Feature: domain Description: RMtype1 _S_SonII-TRD2-CR2_like Location: 404384-404939 bp Feature: gene Location: 404962-406401 bp Ori: OOG42692.1 Feature: domain Description: HsdM Location: 404971-406210 bp Feature: domain Description: HsdM Location: 404971 -40621 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), SRAP (pfam02586), group_II_RT_mat (TIGR04416), RVT-UG13, RMtype1_S_SonII-TRD2-CR2_like (cd17246), HsdM (COG0286)

Seq: MUNQ01000012.1 Rhodanobacter sp. C05 NODE_7_length_289194_cov_10.3352_ID_13, whole genome shotgun sequence (289194 bp)
Overview 1 RT 1: 36113-40286 bp Neighborhood of RT #1 [36113, 40286] ABC_ATPase RVT-Retrons Feature: gene Location: 36113-36754 bp Feature: gene Location: 36811-38151 bp Ori: OOG39173.1 Feature: domain Description: ABC_ATPase Location: 36862-37603 bp Feature: domain Description: ABC_ATPase Location: 36862 -37603 bp Feature: gene Location: 38148-39104 bp Ori: OOG39174.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38265-38811 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 382 65-38811 bp Feature: gene Location: 39390-39689 bp Feature: gene Location: 39873-40286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_ATPase (pfam09818), RVT-Retrons

Seq: MUNQ01000016.1 Rhodanobacter sp. C05 NODE_9_length_246880_cov_9.55288_ID_17, whole genome shotgun sequence (246880 bp)
Overview 1 RT 1: 121346-129588 bp Neighborhood of RT #1 [121346, 129588] DECH_helic DECH_helic YprB RVT-UG7 Feature: gene Location: 121346-123754 bp Ori: OOG38619.1 Feature: domain Description: DECH_helic Location: 121469-123353 bp Feature: domain Description: DECH_helic Location: 121469-123 3 53 bp Feature: domain Description: DECH_helic Location: 123503-123743 bp Feature: domain Description: DECH_helic Location: 123 503 -123 743 bp Feature: gene Location: 123751-124581 bp Ori: OOG38620.1 Feature: domain Description: YprB Location: 124003-124561 bp Feature: domain Description: YprB Location: 124003 -124561 bp Feature: gene Location: 125101-126639 bp Ori: OOG38621.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 125473-125893 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 125473 -125893 bp Feature: gene Location: 127601-128704 bp Feature: gene Location: 129205-129588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DECH_helic (TIGR03817), YprB (COG3359), RVT-UG7