myRT

myRT report for GCA_002001385.1_ASM200138v1

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Seq: MVBR01000004.1 Pseudomonas aeruginosa strain SCH_ABX07 ABX07_contig000004, whole genome shotgun sequence (481127 bp)
Overview 1 RT 1: 17669-21929 bp Neighborhood of RT #1 [17669, 21929] HigB VapI RVT-Retrons Feature: gene Location: 17669-17947 bp Feature: domain Description: HigB Location: 17672-17945 bp Feature: domain Description: HigB Location: 1 7672-1 7945 bp Feature: gene Location: 17959-18264 bp Feature: domain Description: VapI Location: 17971-18250 bp Feature: domain Description: VapI Location: 1 7971 -1 8250 bp Feature: gene Location: 20167-21189 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20389-20923 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20389-20923 bp Feature: gene Location: 21269-21604 bp Feature: gene Location: 21660-21929 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HigB (COG4680), VapI (COG3093), RVT-Retrons

Seq: MVBR01000003.1 Pseudomonas aeruginosa strain SCH_ABX07 ABX07_contig000003, whole genome shotgun sequence (496550 bp)
Overview 1 RT 1: 34919-39629 bp Neighborhood of RT #1 [34919, 39643] PRK09362 PinE RVT-Retrons 5-nucleotidase HTH_XRE Feature: gene Location: 34919-35629 bp Feature: domain Description: PRK09362 Location: 34922-35618 bp Feature: domain Description: PRK09362 Location: 3492 2 -35618 bp Feature: gene Location: 35962-36174 bp Feature: domain Description: PinE Location: 35965-36148 bp Feature: domain Description: PinE Location: 35965-36148 bp Feature: gene Location: 36527-37720 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36683-37265 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36683-372 65 bp Feature: gene Location: 38451-39389 bp Feature: domain Description: 5-nucleotidase Location: 38565-39375 bp Feature: domain Description: 5-nucleotidase Location: 38565-39375 bp Feature: gene Location: 39422-39643 bp Feature: domain Description: HTH_XRE Location: 39458-39629 bp Feature: domain Description: HTH_XRE Location: 39458-3962 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09362 (phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed), PinE (COG1961), RVT-Retrons, 5-nucleotidase (pfam06189), HTH_XRE (smart00530)