myRT

myRT report for GCA_002001705.1_ASM200170v1

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Seq: MPAA01000001.1 Escherichia coli strain 3-R1 NODE_1_length_261479_cov_16.0959, whole genome shotgun sequence (261479 bp)
Overview 1 RT 1: 127697-133806 bp Neighborhood of RT #1 [127697, 133865] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase SfsB Feature: gene Location: 127697-128617 bp Ori: OOK09184.1 Feature: domain Description: AbiEii Location: 127739-128480 bp Feature: domain Description: AbiEii Location: 1 27739-1 28480 bp Feature: gene Location: 128604-129386 bp Ori: OOK09185.1 Feature: domain Description: AbiEi_3_N Location: 128616-128877 bp Feature: domain Description: AbiEi_3_N Location: 1 2861 6-1 28877 bp Feature: domain Description: AbiEi_3 Location: 128889-129345 bp Feature: domain Description: AbiEi_3 Location: 1 28889-1 29345 bp Feature: gene Location: 129702-132911 bp Ori: OOK09186.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 130230-130719 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 30230-1 3071 9 bp Feature: domain Description: nitrilase Location: 132225-132822 bp Feature: domain Description: nitrilase Location: 1 32225-1 32822 bp Feature: gene Location: 133258-133728 bp Feature: gene Location: 133725-133865 bp Ori: OOK09188.1 Feature: domain Description: SfsB Location: 133734-133806 bp Feature: domain Description: SfsB Location: 1 33734-1 33806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), SfsB (COG3423)

Seq: MPAA01000113.1 Escherichia coli strain 3-R1 NODE_113_length_2805_cov_31.6301, whole genome shotgun sequence (2805 bp)
Overview 1 RT 1: 628-2560 bp Neighborhood of RT #1 [628, 2805] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 628-1032 bp Ori: OOJ97091.1 Feature: domain Description: InsE Location: 658-994 bp Feature: domain Description: InsE Location: 658-994 bp Feature: gene Location: 1061-1450 bp Feature: domain Description: PHA02517 Location: 1064-1406 bp Feature: domain Description: PHA02 517 Location: 1064-1406 bp Feature: gene Location: 1534-2805 bp Ori: OOJ97092.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1555-2287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1555-2 2 87 bp Feature: domain Description: GIIM Note: maturase Location: 2362-2560 bp Feature: domain Description: GIIM Note: maturase Location: 2 362 -2 560 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: MPAA01000071.1 Escherichia coli strain 3-R1 NODE_71_length_11665_cov_23.6505, whole genome shotgun sequence (11665 bp)
Overview 1 RT 1: 1-1027 bp Neighborhood of RT #1 [1, 1035] RVT-GII PRK10173 PRK10173 Feature: gene Location: 1-252 bp Ori: OOJ99024.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22-94 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22-94 bp Feature: gene Location: 291-611 bp Ori: OOJ99025.1 Feature: domain Description: PRK10173 Location: 294-522 bp Feature: domain Description: PRK10173 Location: 294-522 bp Feature: gene Location: 586-1035 bp Ori: OOJ99026.1 Feature: domain Description: PRK10173 Location: 589-1027 bp Feature: domain Description: PRK10173 Location: 589-1027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)