myRT

myRT report for GCA_002001825.1_ASM200182v1

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Seq: MOYU01000020.1 Escherichia coli strain 24.1-R1 NODE_20_length_85281_cov_26.6891, whole genome shotgun sequence (85281 bp)
Overview 1 RT 1: 33869-37751 bp Neighborhood of RT #1 [33869, 37756] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 33869-34585 bp Ori: OOI41825.1 Feature: domain Description: rph Location: 33872-34580 bp Feature: domain Description: rph Location: 33872-34580 bp Feature: gene Location: 34651-35292 bp Ori: OOI41826.1 Feature: domain Description: pyrE Location: 34654-35287 bp Feature: domain Description: pyrE Location: 34654-35287 bp Feature: gene Location: 35590-36549 bp Ori: OOI41827.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35725-36274 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35725-36274 bp Feature: gene Location: 36595-37191 bp Ori: OOI41828.1 Feature: domain Description: slmA Location: 36601-37177 bp Feature: domain Description: slmA Location: 36601 -371 77 bp Feature: gene Location: 37298-37756 bp Ori: OOI41829.1 Feature: domain Description: dut Location: 37304-37751 bp Feature: domain Description: dut Location: 37304-37751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: MOYU01000005.1 Escherichia coli strain 24.1-R1 NODE_5_length_323166_cov_26.2996, whole genome shotgun sequence (323166 bp)
Overview 1 RT 1: 11514-18133 bp Neighborhood of RT #1 [11514, 19023] P Q RVT-AbiP2 Phage_GPA Feature: gene Location: 11514-13286 bp Ori: OOI45183.1 Feature: domain Description: P Location: 11541-13272 bp Feature: domain Description: P Location: 11541-132 72 bp Feature: gene Location: 13286-14320 bp Ori: OOI45184.1 Feature: domain Description: Q Location: 13289-14315 bp Feature: domain Description: Q Location: 132 89-14315 bp Feature: gene Location: 14715-16259 bp Ori: OOI45185.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 15132-15585 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 15132 -15585 bp Feature: gene Location: 16425-16643 bp Feature: gene Location: 16747-19023 bp Ori: OOI45186.1 Feature: domain Description: Phage_GPA Location: 17146-18133 bp Feature: domain Description: Phage_GPA Location: 17146-18133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-AbiP2, Phage_GPA (pfam05840)