myRT

myRT report for GCA_002001945.1_ASM200194v1

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Seq: MOZN01000027.1 Escherichia coli strain 11.3-R3 NODE_27_length_54542_cov_16.9415, whole genome shotgun sequence (54542 bp)
Overview 1 RT 1: 49004-52288 bp Neighborhood of RT #1 [49004, 52485] PRK10597 SLATT_5 RVT-UG17 DUF4094 Peptidase_S74 Feature: gene Location: 49004-49252 bp Ori: OOJ30305.1 Feature: domain Description: PRK10597 Location: 49007-49247 bp Feature: domain Description: PRK1 0597 Location: 49007-49247 bp Feature: gene Location: 49476-50018 bp Ori: OOJ30306.1 Feature: domain Description: SLATT_5 Location: 49482-49998 bp Feature: domain Description: SLATT_5 Location: 49482-49998 bp Feature: gene Location: 50005-51375 bp Ori: OOJ30307.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 50233-50839 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 50233-50839 bp Feature: gene Location: 51483-51770 bp Feature: gene Location: 51781-52485 bp Ori: OOJ30309.1 Feature: domain Description: DUF4094 Location: 51823-51913 bp Feature: domain Description: DUF4094 Location: 51 823-51 91 3 bp Feature: domain Description: Peptidase_S74 Location: 52129-52288 bp Feature: domain Description: Peptidase_S74 Location: 521 29-52288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10597 (DNA damage-inducible protein I; Provisional), SLATT_5 (pfam18160), RVT-UG17, DUF4094 (pfam13334), Peptidase_S74 (pfam13884)

Seq: MOZN01000030.1 Escherichia coli strain 11.3-R3 NODE_30_length_42030_cov_87.498, whole genome shotgun sequence (42030 bp)
Overview 1 RT 1: 5588-9278 bp Neighborhood of RT #1 [5588, 9394] RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 5588-5959 bp Feature: gene Location: 5874-6299 bp Feature: gene Location: 6268-7776 bp Ori: OOJ29455.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6526-7258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 652 6-72 58 bp Feature: domain Description: GIIM Note: maturase Location: 7333-7531 bp Feature: domain Description: GIIM Note: maturase Location: 7333-7531 bp Feature: gene Location: 7857-8099 bp Feature: domain Description: PHA02517 Location: 7860-8064 bp Feature: domain Description: PHA02 517 Location: 7860-8064 bp Feature: gene Location: 8318-9394 bp Ori: OOJ29415.1 Feature: domain Description: COG3547 Location: 8357-9278 bp Feature: domain Description: COG3547 Location: 8357-92 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), COG3547 (Transposase )

Seq: MOZN01000003.1 Escherichia coli strain 11.3-R3 NODE_3_length_264263_cov_16.0411, whole genome shotgun sequence (264263 bp)
Overview 1 RT 1: 44594-51448 bp Neighborhood of RT #1 [44594, 51448] PRK11388 RVT-Retrons Feature: gene Location: 44594-46513 bp Ori: OOJ36741.1 Feature: domain Description: PRK11388 Location: 44597-46505 bp Feature: domain Description: PRK113 88 Location: 44597-46505 bp Feature: gene Location: 46550-46780 bp Feature: gene Location: 47805-49562 bp Ori: OOJ36743.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47949-48567 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47949-48567 bp Feature: gene Location: 49809-50936 bp Feature: gene Location: 50933-51448 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional), RVT-Retrons