myRT

myRT report for GCA_002002145.1_ASM200214v1

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Seq: MOZX01000024.1 Escherichia coli strain 6.2-R1 NODE_23_length_58147_cov_10.4368, whole genome shotgun sequence (58147 bp)
Overview 1 RT 1: 13366-16367 bp Neighborhood of RT #1 [13366, 16367] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 13366-13601 bp Feature: domain Description: InsE Location: 13381-13567 bp Feature: domain Description: InsE Location: 1 3381 -1 3567 bp Feature: gene Location: 13610-14098 bp Feature: domain Description: PHA02517 Location: 13613-14087 bp Feature: domain Description: PHA0251 7 Location: 1 361 3-1 4087 bp Feature: gene Location: 14179-15687 bp Ori: OOJ87764.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14437-15169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4437-1 51 69 bp Feature: domain Description: GIIM Note: maturase Location: 15244-15442 bp Feature: domain Description: GIIM Note: maturase Location: 1 5244-1 5442 bp Feature: gene Location: 15656-16081 bp Feature: gene Location: 15996-16367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: MOZX01000058.1 Escherichia coli strain 6.2-R1 NODE_57_length_8113_cov_9.19326, whole genome shotgun sequence (8113 bp)
Overview 1 RT 1: 1069-6932 bp Neighborhood of RT #1 [1069, 6946] PRK13381 DcuC RVT-GII Asparaginase_2 DUF5339 Feature: gene Location: 1069-2325 bp Ori: OOJ84475.1 Feature: domain Description: PRK13381 Location: 1075-2290 bp Feature: domain Description: PRK13381 Location: 1075-2 2 90 bp Feature: gene Location: 2322-3683 bp Ori: OOJ84476.1 Feature: domain Description: DcuC Location: 2325-3657 bp Feature: domain Description: DcuC Location: 2 32 5-3657 bp Feature: gene Location: 4329-4775 bp Ori: OOJ84477.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4635-4737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4635-4737 bp Feature: gene Location: 5308-6330 bp Ori: OOJ84479.1 Feature: domain Description: Asparaginase_2 Location: 5389-6322 bp Feature: domain Description: Asparaginase_2 Location: 5389-632 2 bp Feature: gene Location: 6668-6946 bp Ori: OOJ84478.1 Feature: domain Description: DUF5339 Location: 6731-6932 bp Feature: domain Description: DUF5339 Location: 6731-6932 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13381 (peptidase T; Provisional), DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112), DUF5339 (pfam17274)

Seq: MOZX01000015.1 Escherichia coli strain 6.2-R1 NODE_14_length_104319_cov_10.4065, whole genome shotgun sequence (104294 bp)
Overview 1 RT 1: 13367-17249 bp Neighborhood of RT #1 [13367, 17254] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 13367-13825 bp Ori: OOJ89213.1 Feature: domain Description: dut Location: 13373-13820 bp Feature: domain Description: dut Location: 13 3 73 -13 820 bp Feature: gene Location: 13932-14528 bp Ori: OOJ89214.1 Feature: domain Description: slmA Location: 13938-14514 bp Feature: domain Description: slmA Location: 13 93 8-14514 bp Feature: gene Location: 14574-15533 bp Ori: OOJ89215.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14709-15258 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14709-15258 bp Feature: gene Location: 15831-16472 bp Ori: OOJ89216.1 Feature: domain Description: pyrE Location: 15834-16467 bp Feature: domain Description: pyrE Location: 1583 4-16467 bp Feature: gene Location: 16538-17254 bp Ori: OOJ89217.1 Feature: domain Description: rph Location: 16541-17249 bp Feature: domain Description: rph Location: 16541-17249 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)