myRT

myRT report for GCA_002002405.1_ASM200240v1

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Seq: MQVJ01000002.1 Vibrio sp. OULL4, whole genome shotgun sequence (99430 bp)
Overview 1 RT 1: 8597-15252 bp Neighborhood of RT #1 [8597, 15263] Smc Smc Smc RVT-Retrons PRK11020 LDH_like_2 Feature: gene Location: 8597-10486 bp Feature: domain Description: Smc Location: 8666-8756 bp Feature: domain Description: Smc Location: 8666-8756 bp Feature: domain Description: Smc Location: 9182-9551 bp Feature: domain Description: Smc Location: 91 82-9551 bp Feature: domain Description: Smc Location: 9692-10043 bp Feature: domain Description: Smc Location: 9692-1 0043 bp Feature: gene Location: 10589-11749 bp Feature: gene Location: 12000-13142 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12222-12870 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 2222-1 2870 bp Feature: gene Location: 13828-14184 bp Feature: domain Description: PRK11020 Location: 13831-14182 bp Feature: domain Description: PRK1 1 020 Location: 1 3831 -1 41 82 bp Feature: gene Location: 14268-15263 bp Feature: domain Description: LDH_like_2 Location: 14277-15252 bp Feature: domain Description: LDH_like_2 Location: 1 4277-1 5252 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK11020 (YibL family ribosome-associated protein), LDH_like_2 (cd12183), Smc (COG1196)

Seq: MQVJ01000030.1 Vibrio sp. OULL4, whole genome shotgun sequence (2161 bp)
Overview 1 RT 1: 1-1359 bp Neighborhood of RT #1 [1, 1583] RVT_N RVT-GII GIIM Feature: gene Location: 1-195 bp Feature: gene Location: 111-1583 bp Feature: RT Description: RVT_N Location: 159-402 bp Feature: RT Description: RVT_N Location: 159-402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1074 bp Feature: domain Description: GIIM Note: maturase Location: 1134-1359 bp Feature: domain Description: GIIM Note: maturase Location: 1134-1359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)