myRT

myRT report for GCA_002002595.1_ASM200259v1

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Seq: MQAH01000070.1 Escherichia coli strain 14.3-R4 161, whole genome shotgun sequence (10028 bp)
Overview 1 RT 1: 2250-10029 bp Neighborhood of RT #1 [2250, 10028] PRK11114 RVT-GII RVT-GII GIIM PRK11447 Feature: gene Location: 2250-4400 bp Ori: OOH92594.1 Feature: domain Description: PRK11114 Location: 2310-4383 bp Feature: domain Description: PRK1 1 1 1 4 Location: 231 0-4383 bp Feature: gene Location: 4740-4919 bp Feature: gene Location: 5144-5788 bp Ori: OOH92595.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5432-5783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5432-5783 bp Feature: gene Location: 5795-6490 bp Ori: OOH92596.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5798-6050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5798-6050 bp Feature: domain Description: GIIM Note: maturase Location: 6098-6329 bp Feature: domain Description: GIIM Note: maturase Location: 6098-6329 bp Feature: gene Location: 6657-7063 bp Feature: gene Location: 7530-10028 bp Ori: OOH92597.1 Feature: domain Description: PRK11447 Location: 7533-10029 bp Feature: domain Description: PRK1 1 447 Location: 7533-1 0029 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11114 (cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB), RVT-GII, GIIM (pfam08388), PRK11447 (cellulose synthase subunit BcsC; Provisional)

Seq: MQAH01000052.1 Escherichia coli strain 14.3-R4 145, whole genome shotgun sequence (11526 bp)
Overview 1 RT 1: 1745-4892 bp Neighborhood of RT #1 [1745, 4924] RVT-GII GIIM PHA02517 TraH Feature: gene Location: 1745-2113 bp Feature: gene Location: 2028-2453 bp Feature: gene Location: 2422-3930 bp Ori: OOH94575.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2680-3412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 680-3412 bp Feature: domain Description: GIIM Note: maturase Location: 3487-3685 bp Feature: domain Description: GIIM Note: maturase Location: 3487-3685 bp Feature: gene Location: 4011-4500 bp Feature: domain Description: PHA02517 Location: 4014-4476 bp Feature: domain Description: PHA02 517 Location: 4014-4476 bp Feature: gene Location: 4475-4924 bp Ori: OOH94571.1 Feature: domain Description: TraH Location: 4574-4892 bp Feature: domain Description: TraH Location: 4574-4892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), TraH (pfam06122)

Seq: MQAH01000406.1 Escherichia coli strain 14.3-R4 6, whole genome shotgun sequence (47464 bp)
Overview 1 RT 1: 4541-14279 bp Neighborhood of RT #1 [4541, 14305] BRR2 BRR2 RVT-UG8 RVT-UG3 COG4688 COG4688 Feature: gene Location: 4541-7696 bp Ori: OOH70303.1 Feature: domain Description: BRR2 Location: 5264-5840 bp Feature: domain Description: BRR2 Location: 5264-5840 bp Feature: domain Description: BRR2 Location: 6275-6521 bp Feature: domain Description: BRR2 Location: 6275-6521 bp Feature: gene Location: 7971-8183 bp Feature: gene Location: 8424-10466 bp Ori: OOH70305.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 9036-9483 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 903 6-9483 bp Feature: gene Location: 10459-11808 bp Ori: OOH70306.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 10915-11392 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 10915-113 92 bp Feature: gene Location: 11860-12279 bp Feature: gene Location: 12272-14305 bp Ori: OOH70308.1 Feature: domain Description: COG4688 Location: 12275-13181 bp Feature: domain Description: COG4688 Location: 12275-13 181 bp Feature: domain Description: COG4688 Location: 13556-14279 bp Feature: domain Description: COG4688 Location: 13 556-14279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BRR2 (COG1204), RVT-UG8, RVT-UG3, COG4688 (Uncharacterized protein )