myRT

myRT report for GCA_002002845.1_ASM200284v1

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Seq: MPAI01000120.1 Escherichia coli strain 4.2-R3 NODE_119_length_2749_cov_36.0535, whole genome shotgun sequence (2749 bp)
Overview 1 RT 1: 572-2504 bp Neighborhood of RT #1 [572, 2749] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 572-976 bp Ori: OOK44722.1 Feature: domain Description: InsE Location: 602-938 bp Feature: domain Description: InsE Location: 602-938 bp Feature: gene Location: 1005-1394 bp Feature: domain Description: PHA02517 Location: 1008-1350 bp Feature: domain Description: PHA0251 7 Location: 1 008-1 350 bp Feature: gene Location: 1478-2749 bp Ori: OOK44723.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1499-2231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 499-2231 bp Feature: domain Description: GIIM Note: maturase Location: 2306-2504 bp Feature: domain Description: GIIM Note: maturase Location: 2306-2504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: MPAI01000075.1 Escherichia coli strain 4.2-R3 NODE_74_length_11665_cov_29.1454, whole genome shotgun sequence (11665 bp)
Overview 1 RT 1: 1-1027 bp Neighborhood of RT #1 [1, 1035] RVT-GII PRK10173 PRK10173 Feature: gene Location: 1-252 bp Ori: OOK45424.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22-94 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 -94 bp Feature: gene Location: 291-611 bp Ori: OOK45425.1 Feature: domain Description: PRK10173 Location: 294-522 bp Feature: domain Description: PRK10173 Location: 2 94-52 2 bp Feature: gene Location: 586-1035 bp Ori: OOK45426.1 Feature: domain Description: PRK10173 Location: 589-1027 bp Feature: domain Description: PRK10173 Location: 589-102 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: MPAI01000001.1 Escherichia coli strain 4.2-R3 NODE_1_length_261479_cov_17.3067, whole genome shotgun sequence (261479 bp)
Overview 1 RT 1: 127697-133806 bp Neighborhood of RT #1 [127697, 133865] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase SfsB Feature: gene Location: 127697-128617 bp Ori: OOK62245.1 Feature: domain Description: AbiEii Location: 127739-128480 bp Feature: domain Description: AbiEii Location: 12773 9-128480 bp Feature: gene Location: 128604-129386 bp Ori: OOK62246.1 Feature: domain Description: AbiEi_3_N Location: 128616-128877 bp Feature: domain Description: AbiEi_3 _N Location: 128616-128877 bp Feature: domain Description: AbiEi_3 Location: 128889-129345 bp Feature: domain Description: AbiEi_3 Location: 128889-1293 45 bp Feature: gene Location: 129702-132911 bp Ori: OOK62247.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 130230-130719 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 13 023 0-13 0719 bp Feature: domain Description: nitrilase Location: 132225-132822 bp Feature: domain Description: nitrilase Location: 13 2225-13 2822 bp Feature: gene Location: 133258-133728 bp Feature: gene Location: 133725-133865 bp Ori: OOK62249.1 Feature: domain Description: SfsB Location: 133734-133806 bp Feature: domain Description: SfsB Location: 13 3 73 4-13 3 806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), SfsB (COG3423)