myRT

myRT report for GCA_002006205.1_ASM200620v1

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Seq: LZZI01000082.1 Clostridium beijerinckii strain DSM 53 CLBCK_contig000082, whole genome shotgun sequence (23908 bp)
Overview 1 RT 1: 200-5183 bp Neighborhood of RT #1 [200, 5206] Acetyltransf_1 RVT-GII group_II_RT_mat ACH1 Feature: gene Location: 200-676 bp Feature: domain Description: Acetyltransf_1 Location: 359-638 bp Feature: domain Description: Acetyltransf_1 Location: 359-638 bp Feature: gene Location: 931-1884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1288-1462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 288-1 462 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1465-1690 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 465-1 690 bp Feature: gene Location: 2486-3850 bp Feature: gene Location: 3896-5206 bp Feature: domain Description: ACH1 Location: 3905-5183 bp Feature: domain Description: ACH1 Location: 3905-51 83 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), ACH1 (COG0427), RVT-GII, group_II_RT_mat (TIGR04416)

Seq: LZZI01000243.1 Clostridium beijerinckii strain DSM 53 CLBCK_contig000243, whole genome shotgun sequence (2862 bp)
Overview 1 RT 1: 128-2646 bp Neighborhood of RT #1 [128, 2756] AbrB RVT-GII HNHc Feature: gene Location: 128-370 bp Feature: domain Description: AbrB Location: 131-314 bp Feature: domain Description: AbrB Location: 131-314 bp Feature: gene Location: 450-626 bp Feature: gene Location: 942-2756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1260-1959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 60-1959 bp Feature: domain Description: HNHc Note: nucleases Location: 2514-2646 bp Feature: domain Description: HNHc Note: nucleases Location: 2 514-2 646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbrB (pfam05145), RVT-GII, HNHc (smart00507)