myRT

myRT report for GCA_002007665.1_ASM200766v1

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Seq: CP019772.1 Klebsiella pneumoniae subsp. pneumoniae strain KPN_KPC_HUG_07 genome (5423217 bp)
Overview 1 RT 1: 2997547-3000010 bp 2 RT 2: 3438849-3442847 bp 3 RT 3: 3781961-3786069 bp 4 RT 4: 3969082-3973650 bp 5 RT 5: 5162404-5167284 bp Neighborhood of RT #1 [2997547, 3000010] RVT-GII Neighborhood of RT #2 [3438849, 3442847] int RVT-GII Neighborhood of RT #3 [3781961, 3786071] DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [3969082, 3973652] XerC RVT-GII PRK10276 umuC Neighborhood of RT #5 [5162404, 5167289] YccC PRK10016 RVT-GII dacD Feature: gene Location: 2997547-2997756 bp Feature: gene Location: 2997958-2998209 bp Feature: gene Location: 2998209-2999693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2998611-2999301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 299861 1 -2999301 bp Feature: gene Location: 2999686-2999757 bp Feature: gene Location: 2999771-3000010 bp Feature: gene Location: 3438849-3439829 bp Feature: domain Description: int Location: 3438852-3439779 bp Feature: domain Description: int Location: 3438852-3439779 bp Feature: gene Location: 3440069-3440320 bp Feature: gene Location: 3440320-3441804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3440722-3441412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3440722-3441 41 2 bp Feature: gene Location: 3441797-3441865 bp Feature: gene Location: 3441903-3442847 bp Feature: gene Location: 3781961-3782203 bp Feature: domain Description: DinI Location: 3782012-3782192 bp Feature: domain Description: DinI Location: 378201 2-37821 92 bp Feature: gene Location: 3782570-3782821 bp Feature: gene Location: 3782821-3784305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3783223-3783913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3783223-378391 3 bp Feature: gene Location: 3784384-3784803 bp Feature: domain Description: PRK10276 Location: 3784387-3784798 bp Feature: domain Description: PRK1 0276 Location: 3784387-3784798 bp Feature: gene Location: 3784806-3786071 bp Feature: domain Description: umuC Location: 3784809-3786069 bp Feature: domain Description: umuC Location: 3784809-3786069 bp Feature: gene Location: 3969082-3969504 bp Feature: domain Description: XerC Location: 3969118-3969463 bp Feature: domain Description: XerC Location: 39691 1 8-3969463 bp Feature: gene Location: 3970151-3970402 bp Feature: gene Location: 3970402-3971886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3970804-3971494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3970804-3971 494 bp Feature: gene Location: 3971966-3972385 bp Feature: domain Description: PRK10276 Location: 3971969-3972380 bp Feature: domain Description: PRK1 0276 Location: 3971 969-3972380 bp Feature: gene Location: 3972387-3973652 bp Feature: domain Description: umuC Location: 3972390-3973650 bp Feature: domain Description: umuC Location: 3972390-3973650 bp Feature: gene Location: 5162404-5163462 bp Feature: domain Description: YccC Location: 5162410-5163448 bp Feature: domain Description: YccC Location: 51 6241 0-51 63448 bp Feature: gene Location: 5163561-5164034 bp Feature: domain Description: PRK10016 Location: 5163564-5164023 bp Feature: domain Description: PRK1 001 6 Location: 51 63564-51 64023 bp Feature: gene Location: 5164116-5165600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5164518-5165208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 6451 8-51 65208 bp Feature: gene Location: 5165600-5165851 bp Feature: gene Location: 5166120-5167289 bp Feature: domain Description: dacD Location: 5166129-5167284 bp Feature: domain Description: dacD Location: 51 661 29-51 67284 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, int (PHA02601), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), XerC (COG4973), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397)

Seq: CP019773.1 Klebsiella pneumoniae subsp. pneumoniae strain KPN_KPC_HUG_07 plasmid p1, complete sequence (208528 bp)
Overview 1 RT 1: 153457-156559 bp Neighborhood of RT #1 [153457, 156573] RVT-GII PRK10276 Feature: gene Location: 153457-153735 bp Feature: gene Location: 153794-154024 bp Feature: gene Location: 154258-155742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154660-155350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154660-155350 bp Feature: gene Location: 155742-155993 bp Feature: gene Location: 156148-156573 bp Feature: domain Description: PRK10276 Location: 156151-156559 bp Feature: domain Description: PRK102 76 Location: 156151-156559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)