myRT

myRT report for GCA_002009565.1_ASM200956v1

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Seq: MJBX01000057.1 Enterococcus faecalis strain P. En090 P-En-090_S5_L001_R1_001_(paired)_contig_8, whole genome shotgun sequence (169666 bp)
Overview 1 RT 1: 139642-143892 bp 2 RT 2: 155288-163876 bp Neighborhood of RT #1 [139642, 144112] PRK07983 RVT-GII GIIM DUF4373 DnaD_dom RusA Neighborhood of RT #2 [155288, 163992] TraC-F-type Phage_lysozyme2 PRK08581 RVT-GII DHR10 Feature: gene Location: 139642-140625 bp Feature: domain Description: PRK07983 Location: 139954-140296 bp Feature: domain Description: PRK07983 Location: 1 39954-1 40296 bp Feature: gene Location: 140712-140960 bp Feature: gene Location: 141216-142538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 141516-142152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 51 6-1 421 52 bp Feature: domain Description: GIIM Note: maturase Location: 142224-142440 bp Feature: domain Description: GIIM Note: maturase Location: 1 42224-1 42440 bp Feature: gene Location: 142720-143688 bp Feature: domain Description: DUF4373 Location: 142753-143032 bp Feature: domain Description: DUF4373 Location: 1 42753-1 43032 bp Feature: domain Description: DnaD_dom Location: 143299-143503 bp Feature: domain Description: DnaD_dom Location: 1 43299-1 43503 bp Feature: gene Location: 143685-144112 bp Feature: domain Description: RusA Location: 143706-143892 bp Feature: domain Description: RusA Location: 1 43706-1 43892 bp Feature: gene Location: 155288-157678 bp Feature: domain Description: TraC-F-type Location: 155708-157502 bp Feature: domain Description: TraC-F-type Location: 1 55708-1 57502 bp Feature: gene Location: 157690-160203 bp Feature: domain Description: Phage_lysozyme2 Location: 159322-159847 bp Feature: domain Description: Phage_lysozyme2 Location: 1 59322-1 59847 bp Feature: domain Description: PRK08581 Location: 159967-160186 bp Feature: domain Description: PRK08581 Location: 1 59967-1 601 86 bp Feature: gene Location: 160927-162861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 161251-161986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 61 251 -1 61 986 bp Feature: gene Location: 163134-163760 bp Feature: gene Location: 163747-163992 bp Feature: domain Description: DHR10 Location: 163759-163876 bp Feature: domain Description: DHR1 0 Location: 1 63759-1 63876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07983 (exodeoxyribonuclease X; Provisional), RVT-GII, GIIM (pfam08388), DUF4373 (pfam14297), DnaD_dom (TIGR01446), RusA (pfam05866), TraC-F-type (TIGR02746), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), DHR10 (pfam18595)

Seq: MJBX01000022.1 Enterococcus faecalis strain P. En090 P-En-090_S5_L001_R1_001_(paired)_contig_29, whole genome shotgun sequence (8033 bp)
Overview 1 RT 1: 1-5845 bp Neighborhood of RT #1 [1, 5868] Omega_Repress PRK07726 RVT-GII HNHc PRK07726 PinE Feature: gene Location: 1-189 bp Feature: domain Description: Omega_Repress Location: 7-190 bp Feature: domain Description: Omega_Repress Location: 7-190 bp Feature: gene Location: 337-2013 bp Feature: domain Description: PRK07726 Location: 343-1861 bp Feature: domain Description: PRK0772 6 Location: 343-1861 bp Feature: gene Location: 2266-4152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2581-3319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 581-3319 bp Feature: domain Description: HNHc Note: nucleases Location: 3871-4036 bp Feature: domain Description: HNHc Note: nucleases Location: 3871-4036 bp Feature: gene Location: 4889-5251 bp Feature: domain Description: PRK07726 Location: 4898-5231 bp Feature: domain Description: PRK0772 6 Location: 4898-52 31 bp Feature: gene Location: 5251-5868 bp Feature: domain Description: PinE Location: 5254-5845 bp Feature: domain Description: PinE Location: 52 54-5845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), PRK07726 (DNA topoisomerase 3), PinE (COG1961)