myRT

myRT report for GCA_002009645.1_ASM200964v1

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Seq: MVKV01000003.1 Gordonia sp. IITR100 Scaffold_3, whole genome shotgun sequence (478969 bp)
Overview 1 RT 1: 470304-477272 bp Neighborhood of RT #1 [470304, 477295] UvrA UvrA Acetyltransf_10 RVT-Retrons HGbI_like pimE Feature: gene Location: 470304-472712 bp Feature: domain Description: UvrA Location: 470382-470757 bp Feature: domain Description: UvrA Location: 470382-470757 bp Feature: domain Description: UvrA Location: 470832-472704 bp Feature: domain Description: UvrA Location: 470832-472704 bp Feature: gene Location: 473140-473661 bp Feature: domain Description: Acetyltransf_10 Location: 473371-473644 bp Feature: domain Description: Acetyltransf_1 0 Location: 473371 -473644 bp Feature: gene Location: 473956-475227 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 474391-474994 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 474391 -474994 bp Feature: gene Location: 475338-475811 bp Feature: domain Description: HGbI_like Location: 475371-475743 bp Feature: domain Description: HGbI_like Location: 475371 -475743 bp Feature: gene Location: 476021-477295 bp Feature: domain Description: pimE Location: 476078-477272 bp Feature: domain Description: pimE Location: 476078-477272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UvrA (COG0178), Acetyltransf_10 (pfam13673), RVT-Retrons, HGbI_like, pimE (PRK13375)

Seq: MVKV01000035.1 Gordonia sp. IITR100 Scaffold_35, whole genome shotgun sequence (6528 bp)
Overview 1 RT 1: 3-4767 bp Neighborhood of RT #1 [3, 4767] RVT-UG12 RT_Bac_retron_II Feature: gene Location: 3-329 bp Feature: gene Location: 444-1358 bp Feature: gene Location: 1697-2881 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 1712-2111 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 1712 -2 111 bp Feature: domain Description: RT_Bac_retron_II Location: 2399-2534 bp Feature: domain Description: RT_Bac_retron_II Location: 2 399-2 534 bp Feature: gene Location: 3159-3305 bp Feature: gene Location: 3307-4767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12, RT_Bac_retron_II (cd03487)