myRT

myRT report for GCA_002014585.1_ASM201458v1

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Seq: MUAJ01000056.1 Bacillus cereus strain FSL H8-0485 NODE_56_length_27830_cov_2_83791_ID_11832, whole genome shotgun sequence (27830 bp)
Overview 1 RT 1: 11983-18845 bp Neighborhood of RT #1 [11983, 18845] RVT-GII Intron_maturas2 HNHc TraG-D_C Ftsk_gamma Ftsk_gamma Feature: gene Location: 11983-12375 bp Feature: gene Location: 12393-13538 bp Feature: gene Location: 14139-15962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14406-15237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4406-1 5237 bp Feature: domain Description: Intron_maturas2 Location: 15309-15627 bp Feature: domain Description: Intron_maturas2 Location: 1 5309-1 5627 bp Feature: domain Description: HNHc Note: nucleases Location: 15780-15933 bp Feature: domain Description: HNHc Note: nucleases Location: 1 5780-1 5933 bp Feature: gene Location: 16101-18440 bp Feature: domain Description: TraG-D_C Location: 16560-16920 bp Feature: domain Description: TraG-D_C Location: 1 6560-1 6920 bp Feature: domain Description: Ftsk_gamma Location: 17352-17532 bp Feature: domain Description: Ftsk_gamma Location: 1 7352-1 7532 bp Feature: domain Description: Ftsk_gamma Location: 17685-17844 bp Feature: domain Description: Ftsk_gamma Location: 1 7685-1 7844 bp Feature: gene Location: 18654-18845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696), Ftsk_gamma (smart00843)

Seq: MUAJ01000037.1 Bacillus cereus strain FSL H8-0485 NODE_37_length_48548_cov_8_95445_ID_11790, whole genome shotgun sequence (48548 bp)
Overview 1 RT 1: 25100-31808 bp Neighborhood of RT #1 [25100, 31808] Replic_Relax RVT-GII Feature: gene Location: 25100-25942 bp Feature: domain Description: Replic_Relax Location: 25142-25718 bp Feature: domain Description: Replic_Relax Location: 2 5142 -2 5718 bp Feature: gene Location: 25981-26935 bp Feature: gene Location: 27014-28903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27314-28022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7314-2 802 2 bp Feature: gene Location: 29674-31536 bp Feature: gene Location: 31569-31808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Replic_Relax (pfam13814), RVT-GII

Seq: MUAJ01000057.1 Bacillus cereus strain FSL H8-0485 NODE_57_length_25981_cov_3_34862_ID_11834, whole genome shotgun sequence (25981 bp)
Overview 1 RT 1: 7724-15113 bp Neighborhood of RT #1 [7724, 15113] groEL guaA RVT-Retrons Feature: gene Location: 7724-9358 bp Feature: domain Description: groEL Location: 7727-9344 bp Feature: domain Description: groEL Location: 7727-93 44 bp Feature: gene Location: 9756-11303 bp Feature: domain Description: guaA Location: 9777-11301 bp Feature: domain Description: guaA Location: 9777-113 01 bp Feature: gene Location: 11857-13608 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11983-12574 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11983 -12574 bp Feature: gene Location: 13916-14494 bp Feature: gene Location: 14649-15113 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, groEL (PRK12852), guaA (PRK00074)

Seq: MUAJ01000065.1 Bacillus cereus strain FSL H8-0485 NODE_65_length_18474_cov_4_22014_ID_11846, whole genome shotgun sequence (18474 bp)
Overview 1 RT 1: 16348-18372 bp Neighborhood of RT #1 [16348, 18371] RadC RVT-GII Feature: gene Location: 16348-16596 bp Feature: gene Location: 17109-17342 bp Feature: domain Description: RadC Location: 17166-17343 bp Feature: domain Description: RadC Location: 17166-1734 3 bp Feature: gene Location: 17907-18371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18171-18372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18171-18372 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RadC (pfam04002), RVT-GII

Seq: MUAJ01000024.1 Bacillus cereus strain FSL H8-0485 NODE_24_length_72699_cov_2_64857_ID_11752, whole genome shotgun sequence (72699 bp)
Overview 1 RT 1: 130-3376 bp Neighborhood of RT #1 [130, 3378] Acyl_ACP_Desat RVT-GII Intron_maturas2 DUF4879 YdhG Feature: gene Location: 130-426 bp Feature: domain Description: Acyl_ACP_Desat Location: 190-394 bp Feature: domain Description: Acyl_ACP_Desat Location: 190-394 bp Feature: gene Location: 362-1435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368-1046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368-1046 bp Feature: domain Description: Intron_maturas2 Location: 1130-1415 bp Feature: domain Description: Intron_maturas2 Location: 1130-1415 bp Feature: gene Location: 2232-2657 bp Feature: domain Description: DUF4879 Location: 2322-2652 bp Feature: domain Description: DUF4879 Location: 2322-265 2 bp Feature: gene Location: 3007-3378 bp Feature: domain Description: YdhG Location: 3010-3376 bp Feature: domain Description: YdhG Location: 3010-3376 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acyl_ACP_Desat (cd01050), DUF4879 (pfam16219), YdhG (COG5646), RVT-GII, Intron_maturas2 (pfam01348)

Seq: MUAJ01000084.1 Bacillus cereus strain FSL H8-0485 NODE_84_length_7865_cov_4_52807_ID_11878, whole genome shotgun sequence (7865 bp)
Overview 1 RT 1: 573-4506 bp Neighborhood of RT #1 [573, 4833] DDE_Tnp_1 RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 573-773 bp Feature: gene Location: 1423-1818 bp Feature: domain Description: DDE_Tnp_1 Location: 1432-1534 bp Feature: domain Description: DDE_Tnp_1 Location: 1432-1534 bp Feature: gene Location: 1965-3269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2250-2889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2250-2889 bp Feature: domain Description: GIIM Note: maturase Location: 2961-3189 bp Feature: domain Description: GIIM Note: maturase Location: 296 1-3189 bp Feature: gene Location: 3443-3622 bp Feature: gene Location: 3774-4833 bp Feature: domain Description: DDE_Tnp_1 Location: 4131-4506 bp Feature: domain Description: DDE_Tnp_1 Location: 4131-4506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388)