myRT

myRT report for GCA_002014615.1_ASM201461v1

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Seq: MUAQ01000132.1 Bacillus pseudomycoides strain FSL H8-0534 NODE_132_length_2959_cov_33.4883, whole genome shotgun sequence (2959 bp)
Overview 1 RT 1: 1-2959 bp Neighborhood of RT #1 [1, 2959] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-200 bp Feature: gene Location: 298-2115 bp Ori: OOR46712.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 562-1393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 562-1 393 bp Feature: domain Description: Intron_maturas2 Location: 1468-1762 bp Feature: domain Description: Intron_maturas2 Location: 1 468-1 762 bp Feature: domain Description: HNHc Note: nucleases Location: 1933-2086 bp Feature: domain Description: HNHc Note: nucleases Location: 1 933-2086 bp Feature: gene Location: 2719-2959 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: MUAQ01000142.1 Bacillus pseudomycoides strain FSL H8-0534 NODE_142_length_2303_cov_379.56, whole genome shotgun sequence (2303 bp)
Overview 1 RT 1: 105-1413 bp Neighborhood of RT #1 [105, 1754] RVT_N RVT-GII GIIM Feature: gene Location: 105-1754 bp Ori: OOR46331.1 Feature: domain Description: RVT_N Location: 153-399 bp Feature: domain Description: RVT_N Location: 153-399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453-1113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453-1113 bp Feature: domain Description: GIIM Note: maturase Location: 1179-1413 bp Feature: domain Description: GIIM Note: maturase Location: 1179-1413 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: MUAQ01000010.1 Bacillus pseudomycoides strain FSL H8-0534 NODE_10_length_119591_cov_37.4967, whole genome shotgun sequence (119591 bp)
Overview 1 RT 1: 113769-119165 bp Neighborhood of RT #1 [113769, 119440] DUF3994 DUF4352 DUF5105 RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 113769-114731 bp Ori: OOR51568.1 Feature: domain Description: DUF3994 Location: 114213-114522 bp Feature: domain Description: DUF3 994 Location: 114213 -114522 bp Feature: gene Location: 114963-116018 bp Ori: OOR51569.1 Feature: domain Description: DUF4352 Location: 115077-115398 bp Feature: domain Description: DUF43 52 Location: 115077-1153 98 bp Feature: domain Description: DUF5105 Location: 115464-116013 bp Feature: domain Description: DUF5105 Location: 115464-116013 bp Feature: gene Location: 116482-117399 bp Ori: OOR51570.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116686-116845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116686-116845 bp Feature: domain Description: GIIM Note: maturase Location: 117097-117313 bp Feature: domain Description: GIIM Note: maturase Location: 117097-1173 13 bp Feature: gene Location: 117693-117884 bp Feature: gene Location: 118010-119440 bp Ori: OOR51572.1 Feature: domain Description: DDE_Tnp_1 Location: 118367-119165 bp Feature: domain Description: DDE_Tnp_1 Location: 1183 67-119165 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: MUAQ01000031.1 Bacillus pseudomycoides strain FSL H8-0534 NODE_31_length_45444_cov_25.9762, whole genome shotgun sequence (45444 bp)
Overview 1 RT 1: 15291-21818 bp Neighborhood of RT #1 [15291, 21895] Uup ABC_tran_CTD BaxI_1 RVT-GII GIIM HNHc PRK06752 AcrR Feature: gene Location: 15291-17183 bp Ori: OOR49682.1 Feature: domain Description: Uup Location: 15294-16884 bp Feature: domain Description: Uup Location: 15294 -16884 bp Feature: domain Description: ABC_tran_CTD Location: 16965-17160 bp Feature: domain Description: ABC_tran_CTD Location: 16965-17160 bp Feature: gene Location: 17259-17990 bp Ori: OOR49683.1 Feature: domain Description: BaxI_1 Location: 17274-17979 bp Feature: domain Description: BaxI_1 Location: 17274 -17979 bp Feature: gene Location: 18945-20807 bp Ori: OOR49684.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19239-19944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19239-1994 4 bp Feature: domain Description: GIIM Note: maturase Location: 20043-20250 bp Feature: domain Description: GIIM Note: maturase Location: 2004 3-20250 bp Feature: domain Description: HNHc Note: nucleases Location: 20553-20727 bp Feature: domain Description: HNHc Note: nucleases Location: 20553-20727 bp Feature: gene Location: 21040-21330 bp Feature: domain Description: PRK06752 Location: 21043-21325 bp Feature: domain Description: PRK06752 Location: 2104 3-21325 bp Feature: gene Location: 21530-21895 bp Ori: OOR49685.1 Feature: domain Description: AcrR Location: 21545-21818 bp Feature: domain Description: AcrR Location: 2154 5-21818 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: MUAQ01000118.1 Bacillus pseudomycoides strain FSL H8-0534 NODE_118_length_4059_cov_40.3438, whole genome shotgun sequence (4059 bp)
Overview 1 RT 1: 1-2516 bp Neighborhood of RT #1 [1, 2516] RVT-GII Intron_maturas2 HNHc Spr Feature: gene Location: 1-395 bp Feature: gene Location: 417-1283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426-558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426-5 5 8 bp Feature: domain Description: Intron_maturas2 Location: 630-927 bp Feature: domain Description: Intron_maturas2 Location: 630-927 bp Feature: domain Description: HNHc Note: nucleases Location: 1104-1257 bp Feature: domain Description: HNHc Note: nucleases Location: 1104-125 7 bp Feature: gene Location: 1400-1867 bp Ori: OOR47516.1 Feature: domain Description: Spr Location: 1460-1850 bp Feature: domain Description: Spr Location: 1460-185 0 bp Feature: gene Location: 1917-2516 bp Sorry, your browser does not support inline SVG.
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