myRT

myRT report for GCA_002018535.1_ASM201853v1

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Seq: MKQT01000164.1 Vibrio parahaemolyticus strain PMA2.15 contig54, whole genome shotgun sequence (29181 bp)
Overview 1 RT 1: 674-6684 bp Neighborhood of RT #1 [674, 6731] PRK05367 RVT-UG17 SLATT_5 YcxB Feature: gene Location: 674-3538 bp Ori: OOX25716.1 Feature: domain Description: PRK05367 Location: 695-3533 bp Feature: domain Description: PRK05367 Location: 695-3533 bp Feature: gene Location: 3776-4012 bp Feature: gene Location: 4035-5111 bp Ori: OOX25718.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4257-4839 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 4257-4839 bp Feature: gene Location: 5123-5671 bp Ori: OOX25719.1 Feature: domain Description: SLATT_5 Location: 5132-5660 bp Feature: domain Description: SLATT_5 Location: 51 32-5660 bp Feature: gene Location: 6237-6731 bp Ori: OOX25720.1 Feature: domain Description: YcxB Location: 6537-6684 bp Feature: domain Description: YcxB Location: 6537-6684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05367 (aminomethyl-transferring glycine dehydrogenase), RVT-UG17, SLATT_5 (pfam18160), YcxB (pfam14317)

Seq: MKQT01000134.1 Vibrio parahaemolyticus strain PMA2.15 contig24, whole genome shotgun sequence (52282 bp)
Overview 1 RT 1: 217-5827 bp Neighborhood of RT #1 [217, 5871] COG5340 RVT-UG28 HATPase COG4190 Feature: gene Location: 217-504 bp Feature: gene Location: 1213-1740 bp Ori: OOX28154.1 Feature: domain Description: COG5340 Location: 1333-1621 bp Feature: domain Description: COG5340 Location: 1333-162 1 bp Feature: gene Location: 1873-3375 bp Ori: OOX28155.1 Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 2161-2800 bp Feature: RT Description: RVT-UG2 8 Note: UG2 8 RT Location: 2 161-2 800 bp Feature: gene Location: 3685-4710 bp Ori: OOX28156.1 Feature: domain Description: HATPase Location: 4150-4552 bp Feature: domain Description: HATPase Location: 4150-4552 bp Feature: gene Location: 5485-5871 bp Ori: OOX28157.1 Feature: domain Description: COG4190 Location: 5500-5827 bp Feature: domain Description: COG4190 Location: 5500-582 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), RVT-UG28, HATPase (cl00075), COG4190 (Predicted transcriptional regulator )